| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2360 |
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| Symbol | |
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| ID | 5108202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2605166 |
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| End bp | 2606149 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503602 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001187850 |
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| Protein GI | 146307385 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.113129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00199253 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTACAG CTCAACTGAA CGACTCGCTC GTGGTGATCA CCGGTGCATC GAGCGGCATT
GGCCGTTGCG CCGCCCATGA ATTCGCCCGC CACGGGGCAC GCCTGGTGCT CGCCGCTCGC
GATGCCCAAG CGCTTGCCGC CGTGGTCAGG GAGTGCGAGC AGCTTGGCGC GCAGGCGCTG
GCAGTGCCCA CGGACGTCAC TCGCAACCAG GCCATGGAGC ACCTGGCCAA GCAGGCGGCA
GACTTCGGCG CCGGGCGTAT CGATGTCTGG GTGAACAACG CCGGCGTCGG CGCCGTTGGC
CGCTTCGAGG ACACGCCGCT GGCTGCTCAC GAACAGGTCG TGCAGACCGA CCTGCTCGGT
TACCTGCGCG GCGCCTACGT CGTGCTGCCG TATTTCAAAG CGCAGAAATC GGGCGTATTG
ATCAACACCC TGTCGCTCGG CAGCTGGGTC GCCCAACCCT ACGCCGCGGC CTATTCCGCG
GCCAAGTACG GCCTGCGCGG ATTGACGGAA GCGCTGCGTG GCGAACTCAC GCCCTGGCCG
AACATTCACG TCTGCGATCT CTACCCAGCC GTGATGGATA CCCCTGGCTT TCGCGATGGC
GGCAACTTCA CCGGCCGGGC ACTGACCCCG CCACCGCCGC GCTACGATCC GCGCCTGGTC
GCCGAAGCCA TGATCGAAGT CGTGCTCAAG CCCAGAGCCA GCAAAACGGT GGGCAGCACG
GCCGCCCTGC TGCGGCTCGC CCATTTCCTG GTGCCCGGCT TTACCCAGCT TTCCGGCCTG
ATCGTCGGAC GAGCCCTGAA GCGGGGACAG CGCGCCCGGC CTTCCAGCGG CAACCTCTTC
CATCCGCCGT CTGGAGAACG ACGCATCGAC GGCGGCTGGC GCGAACCGGC CGGCGACAGC
CAGATGCCCA GGCTGATGAC CGCAACGGCG GTGGTCCTGT TGCTCGGCTG GGGCCTGCTG
CACTTGCGAA ACGAGTCGCG GTAA
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| Protein sequence | MATAQLNDSL VVITGASSGI GRCAAHEFAR HGARLVLAAR DAQALAAVVR ECEQLGAQAL
AVPTDVTRNQ AMEHLAKQAA DFGAGRIDVW VNNAGVGAVG RFEDTPLAAH EQVVQTDLLG
YLRGAYVVLP YFKAQKSGVL INTLSLGSWV AQPYAAAYSA AKYGLRGLTE ALRGELTPWP
NIHVCDLYPA VMDTPGFRDG GNFTGRALTP PPPRYDPRLV AEAMIEVVLK PRASKTVGST
AALLRLAHFL VPGFTQLSGL IVGRALKRGQ RARPSSGNLF HPPSGERRID GGWREPAGDS
QMPRLMTATA VVLLLGWGLL HLRNESR
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