| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3972 |
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| Symbol | |
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| ID | 1046591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4480131 |
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| End bp | 4481456 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637147382 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_746102 |
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| Protein GI | 26990677 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.155927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGATC AAGCGACAGG TATGAAATCA GGTGAGCGCT ACAGGGTTGA GAACGTGGAG
CGAGCGCATC AGTTTCCAGG CTTCTTTCAA GACGGGAAAT ATTATCTAGG CCCCGAGCTT
CTCACCGCCG TGGGATGGCT CGAAGGTACA CGCTTCATCT ACGACAGCCT GGATGCTGAA
GGTGAACCCG TGTTTCCAAA CAAAGAGGCA GGTACGGTCG AAGGGCTGAC GTTGACCCTG
GTCGATGGCA CCGCCCTTGA GCTCTCTCTG GTCGAGGCCG ACGAAATCAT CGCACCCTTC
GAACACCGTA GCAGCGGCAC AGAGCAAGAA GCTCCCCGTA GGGGATATCC CGTCAGGGGG
CCGCTGCGTG GCAAAGTTGT GGTAATCACA GGGGCATCCA GCGGCATAGG CCGCGCCGCC
GCGCACGCCT TTGCCTGCAA AGGCGCACGC TTGGTGCTCG CAGCCCGCGA TGAAGAAGCA
TTATTTGACG TTCTGGATGA ATGCACCGAT TGTGGTACGG ATGCCATAGC GGTCACCACC
GACGTCACCC ACAGCGACCA GGTTCAAGCG CTGGCCGCCC AGGCCTCAGC GTTTGGCCAT
GGACGGATCG ATATCTGGGT CAACAACGCC GGAGTTGGTG CGGTTGGGAA CTTTGAGGAT
ACCCCGCTGG AAGCTCACGA ACAGGTTATC CAGACCGATC TGATTGGATA CCTGCGAGGC
GCCTACGTCG CCCTTCCCTT CTTCAAAGCG CAAGGTAGCG GCATTTTGAT CAACACACTG
TCGCTGGGCA GCTGGGTGGC CCAGCCCTAT GCAGCGGCTT ATTCGGCGAG CAAGTTCGGT
TTGCGTGGAC TGACCGAGGC CCTGCGAGGG GAGCTGACCA AGTTTCCAAA CATCCATGTT
TGCGACATCT ATCCAGCTGT CATGGACACA CCCGGCTTCC GAGACGGCGG CAACTACACC
GGGCATGCGC TGACACCGCC AAGCCCCATC TACGATCCCG AACGGGTAGC CAAGACAATG
GTAGCCTGTG CAATTTCACC TCGAGCTCAC ACAACGGTCG GGACTGCTGC TCGCCTCGCA
CACTTGGCCA GCTACCTAGT ACCAGGAATA GCTTTGTTGT CTGGATGGGT AACGCGGTGG
GGGATAAATC GCAGTCCCAT AGCCGAAACC TCATCGGGCA ACCTGTTTGA GCCTCCAAGT
GACAGAAGGA GTATCGACGG AGGGTGGAGG AAACCTAAAG CTAAAACGCC CCTGCTAATA
GGCGCAGCGG CGCTTGGAAT CATCGCAGGG TTAACAATCG CCTGTTCCCG ACGCAGGAAA
CACTAG
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| Protein sequence | MVDQATGMKS GERYRVENVE RAHQFPGFFQ DGKYYLGPEL LTAVGWLEGT RFIYDSLDAE
GEPVFPNKEA GTVEGLTLTL VDGTALELSL VEADEIIAPF EHRSSGTEQE APRRGYPVRG
PLRGKVVVIT GASSGIGRAA AHAFACKGAR LVLAARDEEA LFDVLDECTD CGTDAIAVTT
DVTHSDQVQA LAAQASAFGH GRIDIWVNNA GVGAVGNFED TPLEAHEQVI QTDLIGYLRG
AYVALPFFKA QGSGILINTL SLGSWVAQPY AAAYSASKFG LRGLTEALRG ELTKFPNIHV
CDIYPAVMDT PGFRDGGNYT GHALTPPSPI YDPERVAKTM VACAISPRAH TTVGTAARLA
HLASYLVPGI ALLSGWVTRW GINRSPIAET SSGNLFEPPS DRRSIDGGWR KPKAKTPLLI
GAAALGIIAG LTIACSRRRK H
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