| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2427 |
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| Symbol | |
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| ID | 5191533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2777193 |
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| End bp | 2778521 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586883 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001267749 |
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| Protein GI | 148547647 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.15313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.413243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC AAGCGACAGG CATGAAACCA GGCGAACGTT ACCGCGTCGA GAACGTCGAG
CGCGCCCATC AATTCCCCGG CTTTTTTCTG GACGGTAGAT ATTACCTTGG CCCCGAACTG
CTGACGGCTG TCGGCTGGCT TGAAGGCACG AAGTTCATTT ATGACAGCCT GGATGCGGAG
GGTGAGCCGG TATTCCCCGA TCGGGTGGCC GGCACCATCG AGGAGCTGAA ATTGGTGCTG
GTCGACGGCA CCGCCCTGGA GCTCTCGAGG ATAGAAGCCC GTGCTTTCCT CGAATCTGCG
ACTGACGCGT TCGAGCAAGA TTCACCGCCG GCCGAGCCTT CATGCTCAGC ACAGGTAAAA
GGCCCGTTGC GCGGCAAGGT CGTGGTCATC ACCGGCGCTT CAAGTGGCAT AGGGAGGGCC
ACCGCGCATG CGTTTGCCTG CAAAGGTGCT CGCCTGGTCC TGGCCGCACG GGATGAAGAA
GCGTTGTTCG AGGTGCTGGA CGAGTGCACC GATTGCGGGA CGGACGCCGT GGCAATCACC
ACCGACGTTA CCAGCAGCGA TCAAATGCGA GCGCTGGCCG CACAGGCTGC CGAATTTGGC
CATGGCCGGA TCGATATCTG GGTCAACAAC GCCGGCGTTG GTGTGGTCGG CAGCTTCGAG
AAAACGCCGC TGGAAGCCCA TGAACAGGTC ATTCAAACCG ACCTGGTCGG TTACCTGCGC
GGCGCTCATG TGGCCCTGCC CTACTTCAAG GCGCAGCGCA GCGGCATCCT GATCAACACG
CTGTCACTGG GCAGCTGGGT TGCCCAGCCC TATGCAGCGG CCTACTCGGC AAGCAAATTC
GGCCTGCGTG GCCTGACCGA TGCGCTGCGG GGAGAGTTGA CGGAATTTGC CGATATCCAT
GTCTGCGATA TCTATCCAGC GGTCATGGAC ACGCCAGGGT TCAGGGATGG CGGTAACTAC
ACCGGCCATG CCCTCACCCC GCCTGGGCCG CTCTACGATC CAGAACGGGT GGCAAAGGCC
ATGGTCGCAT GCGCCATTTC CCCTCGTGCA CACACCACGG TCGGCACCGC CGCCCGCCTT
GCCCACCTGG CCAGCTTCCT CGTTCCAGGT CTACCACAGG TTTCGGGATG GCTGACACGC
TGGGGCATAC ACCGCAGTCC CCGTGCAACC ATTTCCTCAG GCAATCTGTT CGAACCGCCG
AGTGGCCGAC GCCGCGTGGA CGGTGGCTGG CGAAGCCGCA AAAACAACAC ACCGTTGTGG
GTGAGTGCAG CTGTCCTGGG CATTATTGCC GGGCTAGTCA TTACTCGCAC GCAACGCAGG
CGCCGCTGA
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| Protein sequence | MIDQATGMKP GERYRVENVE RAHQFPGFFL DGRYYLGPEL LTAVGWLEGT KFIYDSLDAE
GEPVFPDRVA GTIEELKLVL VDGTALELSR IEARAFLESA TDAFEQDSPP AEPSCSAQVK
GPLRGKVVVI TGASSGIGRA TAHAFACKGA RLVLAARDEE ALFEVLDECT DCGTDAVAIT
TDVTSSDQMR ALAAQAAEFG HGRIDIWVNN AGVGVVGSFE KTPLEAHEQV IQTDLVGYLR
GAHVALPYFK AQRSGILINT LSLGSWVAQP YAAAYSASKF GLRGLTDALR GELTEFADIH
VCDIYPAVMD TPGFRDGGNY TGHALTPPGP LYDPERVAKA MVACAISPRA HTTVGTAARL
AHLASFLVPG LPQVSGWLTR WGIHRSPRAT ISSGNLFEPP SGRRRVDGGW RSRKNNTPLW
VSAAVLGIIA GLVITRTQRR RR
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