Gene PputW619_3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3131 
Symbol 
ID6112081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3467455 
End bp3468192 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content60% 
IMG OID641622916 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001749990 
Protein GI170722302 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCA TCGAACAAAA AGTCATCGTC ATCACCGGCG CCAGCAGTGG TATCGGCGAA 
GCGACAGCCC GCCTGCTTGC CAGCAAAGGC GCTCGCGTGG TCCTGGGCGC CCGCCGCACC
GATCGCCTGG AAACTCTGGC CAGGGAGATT CGTTCAGCAG GCGATGTCGC TGATGTCCTG
GCGCTGGATG TCACCAACCT AGATGACATG CAGTCCTTTA TCGACTTCGC TATCGAACTG
CACGGACGCG TCGACGTGCT GATCAACAAT GCCGGCGTCA TGCCGCTTTC GAAACTCGAA
GCGCTCAAGG TAGATGAGTG GAACCGCATG ATCGATGTGA ACATTCGCGG CGTCCTGCAC
GGCATTGCCG CAACGCTGCC GCTCATGCAA GAACAGCGTG CCGGTCAGAT CATCAATATT
GCCTCGATTG GAGCCTACGC CGTGAGCCCG ACCGCTGCGG TGTACTGCGC TACCAAATAT
GCCGTACGGG CCATTTCCGA AGGTTTGCGC CAGGAGGTTG GGGGGGACAT CCGGGTCACC
GTCATTGCCC CAGGCGTCAC CGAGTCCGAA CTGGCCGACA GCATTTCCGA TGAGGGCGGG
CGAACCGAGA TGCGCGAGTT CCGCAAGATC GCGATTCCAG CCTCGGCGAT TGCCCGGGCG
ATCGCCTACG CCGTAGAACA GCCTGCAGAT GTCGATGTCA GCGAACTGAT CGTGCGTCCA
ACCGCAAGTC CATTCTGA
 
Protein sequence
MHGIEQKVIV ITGASSGIGE ATARLLASKG ARVVLGARRT DRLETLAREI RSAGDVADVL 
ALDVTNLDDM QSFIDFAIEL HGRVDVLINN AGVMPLSKLE ALKVDEWNRM IDVNIRGVLH
GIAATLPLMQ EQRAGQIINI ASIGAYAVSP TAAVYCATKY AVRAISEGLR QEVGGDIRVT
VIAPGVTESE LADSISDEGG RTEMREFRKI AIPASAIARA IAYAVEQPAD VDVSELIVRP
TASPF