Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3131 |
Symbol | |
ID | 6112081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3467455 |
End bp | 3468192 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641622916 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001749990 |
Protein GI | 170722302 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGCA TCGAACAAAA AGTCATCGTC ATCACCGGCG CCAGCAGTGG TATCGGCGAA GCGACAGCCC GCCTGCTTGC CAGCAAAGGC GCTCGCGTGG TCCTGGGCGC CCGCCGCACC GATCGCCTGG AAACTCTGGC CAGGGAGATT CGTTCAGCAG GCGATGTCGC TGATGTCCTG GCGCTGGATG TCACCAACCT AGATGACATG CAGTCCTTTA TCGACTTCGC TATCGAACTG CACGGACGCG TCGACGTGCT GATCAACAAT GCCGGCGTCA TGCCGCTTTC GAAACTCGAA GCGCTCAAGG TAGATGAGTG GAACCGCATG ATCGATGTGA ACATTCGCGG CGTCCTGCAC GGCATTGCCG CAACGCTGCC GCTCATGCAA GAACAGCGTG CCGGTCAGAT CATCAATATT GCCTCGATTG GAGCCTACGC CGTGAGCCCG ACCGCTGCGG TGTACTGCGC TACCAAATAT GCCGTACGGG CCATTTCCGA AGGTTTGCGC CAGGAGGTTG GGGGGGACAT CCGGGTCACC GTCATTGCCC CAGGCGTCAC CGAGTCCGAA CTGGCCGACA GCATTTCCGA TGAGGGCGGG CGAACCGAGA TGCGCGAGTT CCGCAAGATC GCGATTCCAG CCTCGGCGAT TGCCCGGGCG ATCGCCTACG CCGTAGAACA GCCTGCAGAT GTCGATGTCA GCGAACTGAT CGTGCGTCCA ACCGCAAGTC CATTCTGA
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Protein sequence | MHGIEQKVIV ITGASSGIGE ATARLLASKG ARVVLGARRT DRLETLAREI RSAGDVADVL ALDVTNLDDM QSFIDFAIEL HGRVDVLINN AGVMPLSKLE ALKVDEWNRM IDVNIRGVLH GIAATLPLMQ EQRAGQIINI ASIGAYAVSP TAAVYCATKY AVRAISEGLR QEVGGDIRVT VIAPGVTESE LADSISDEGG RTEMREFRKI AIPASAIARA IAYAVEQPAD VDVSELIVRP TASPF
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