Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5897 |
Symbol | |
ID | 8016532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | + |
Start bp | 449920 |
End bp | 450906 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644828014 |
Product | short chain dehydrogenase |
Protein accession | YP_002979214 |
Protein GI | 241518586 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGAACG AGGCGAAGGC CGTGGTGATC ACCGGAGCGT CAAGCGGGAT CGGGCAGGCC ACCGCTGAGG CCTTCGCACG TCAGGGCGCC AAGCTCGTGA TTGCCGCGCG GAATGCGGCC GCACTTCAGT CTGTGGCAAA CACGTGCCGC GAGCTGGGTG CCGACGTCCT CGTCGTGCCG ACCGATGTGA CCGATGCCGA TCAGGTCAAG GCACTCGCCA AGGCGGCGCT GAGCTTCGGC GCGATCGATG TCTGGGTCAG CAATGTCGGC GTCGGCGCGG TTGGCAAATT CCAGGACACA CCGATCGAAG CGCACGATCA GGTGGTCCGC GCCAATCTCA TCGGCCATAT GAACGATGCT CACGCCGTCC TGCCGATTTT CCTGAAGCAA GATCGCGGCA TATTCATCAA CATGATCTCG CTCGGCGGAT TCGCGGCGGC GCCCTATGCC ACGGCTTATA GCGCCAGCAA ATTCGGGCTG AAGGGATTTT CGGAAGCGCT GAGGGGCGAA CTGGCGGATC ATCCGAACAT CCATATCTGC GATATCTACC CGGCATTTAT TGATACGCCG GGGATCAGCC ATGGGGCCAA CTATACCGGC CGCCAACTTT CGGCTCCGCC ACCGGTTTAC GACGCGCGCA AGGTCGCCGA CGCTGTCGTG AGGGTGTCCC GGCATCCAAA GGCGACAACG ACAGTGGGTG CAACGGCAGA GCTGATACGC TTTGGACATT TCTTTGCGCC TAGCTTGAGC GCGCGGTTCA TGAACTGGTT CATGACGACT TACTTCAAGC TTGCGGACAC GACGCCGATT ACCGATGGCA ATCTCTACGC TCCTTCATCT CGGCCCGGCG GCATTGATGG CGGATTACGT TCCGGCAGGC AGCGCGTGGC GCTAGGTGCG GTGGCTGCCA CCGCGGCCAT AGCGCTCGGT CTCTTCACAT TGGCAAACGC ATACAGCCGC AACAGGCATC GCAACCAATG GAGATAG
|
Protein sequence | MENEAKAVVI TGASSGIGQA TAEAFARQGA KLVIAARNAA ALQSVANTCR ELGADVLVVP TDVTDADQVK ALAKAALSFG AIDVWVSNVG VGAVGKFQDT PIEAHDQVVR ANLIGHMNDA HAVLPIFLKQ DRGIFINMIS LGGFAAAPYA TAYSASKFGL KGFSEALRGE LADHPNIHIC DIYPAFIDTP GISHGANYTG RQLSAPPPVY DARKVADAVV RVSRHPKATT TVGATAELIR FGHFFAPSLS ARFMNWFMTT YFKLADTTPI TDGNLYAPSS RPGGIDGGLR SGRQRVALGA VAATAAIALG LFTLANAYSR NRHRNQWR
|
| |