| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6285 |
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| Symbol | |
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| ID | 6182726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 873611 |
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| End bp | 874594 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641689412 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001816271 |
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| Protein GI | 172065559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.306501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00902289 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGACCG TCGCGATTAC CGGTGCGAGC GCCGGCGTCG GCCGCGCGAC TGCGCACGCG
TTCGCGCGGC TCGGCGCGAA CGTCGCGCTG CTCGCACGCG ATCCGCGCGC GCTGGACGAC
ACCGCGTCCG AAGTGCGCGC GTATGGCGTC GAGGCGCTGC CGATCGCGGT CGACGTCAGC
GACGCCGCCG CGCTCGATGC GGCCGCCGAG CGCATCGAGA ACGAACTCGG CCCGCTCGAC
GTGTGGGTCA ACAATGCGAT GGTGACCGTG TTCGCGCCTT TCGACGAAAT CTCGCCGGAA
GACTATGCAC GCGTGACCGA GGTCACCTAT CTGGGCTGCG TGTACGGCAC GCGTGCGGCG
CTCGCGCGGA TGGCGCCGCG CAATCGCGGC ACGATCGTGC AGGTCGGCTC CGCGCTCGCG
TACCGGTCGA TCCCGCTGCA GTCGGCGTAC TGCGGCGCGA AGCATGCGAT CCGCGGCTTC
ACCGACGCGC TGCGCTGCGA GCTGCTGCAT GCGCACAGCC GCGTGCGCGT GACGATGGTG
CAACTGCCGG CGATCGACAC GCCGCAGTTC GACTGGGCCC AATCCACGTT GCCGAATGCG
CCGCGTCCGG TCGCGCCCGT CTATGCGCCG GAAGTGGCGG CCGACGCGAT CGTGCAGGCC
GCGCGTCGTC CGTGCCGCGA GCGCTGGGTT GGCTGGTCGT CGCTCGCCGC GATCGCGGCG
AACGCGTTCG CGCCGGGCTG CTTTGACCGC TATCTCGCGC TGACGGCCGT GCGCGGCCAG
CAGCGCGCGA CGCCGGCCGG GCCGCGCGAG TCGAATCTGT GGCATACCGT GCCGGCCGGC
CATGCGACGC GCGGCGCGTT CACCGCCGAA GCGCGCCGCA CCGGCGCCGA AGCGGGCCTT
GGCGCGTCGC GCGCGCTCGC GTTCGCGGCG GTCTTCGCGG TGCTCGCGGC GGGTTTCGTC
GCCGCGCGCA AGCTGGACCG GTGA
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| Protein sequence | MKTVAITGAS AGVGRATAHA FARLGANVAL LARDPRALDD TASEVRAYGV EALPIAVDVS
DAAALDAAAE RIENELGPLD VWVNNAMVTV FAPFDEISPE DYARVTEVTY LGCVYGTRAA
LARMAPRNRG TIVQVGSALA YRSIPLQSAY CGAKHAIRGF TDALRCELLH AHSRVRVTMV
QLPAIDTPQF DWAQSTLPNA PRPVAPVYAP EVAADAIVQA ARRPCRERWV GWSSLAAIAA
NAFAPGCFDR YLALTAVRGQ QRATPAGPRE SNLWHTVPAG HATRGAFTAE ARRTGAEAGL
GASRALAFAA VFAVLAAGFV AARKLDR
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