Gene PputW619_2737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2737 
Symbol 
ID6111688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3025502 
End bp3026239 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID641622524 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001749598 
Protein GI170721910 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCA TCCAACAAAA AGTCATCGTA ATTACCGGCG CCAGCAGTGG TATCGGCGAA 
GCGACAGCCC GCCTGCTCGC CAGCAAAGGC GCTCGCGTGG TTTTGGGTGC CCGCCGCACC
GATCGCCTGG AAGCTCTGGC CAAGGAGATT CGCTCAGCAG GCGGTACCGC TGATGTAAAG
GGGCTGGATG TCACCAACCT GGATGACATG CAGTCCTTCA TTGACTTCAC TGTCGAATTG
CATGGCCGCG TCGACGTTCT CGTCAACAAC GCTGGAGTCA TGCCGCTCTC GAAGCTCGAA
GCGCTCAAGG TCGATGAGTG GAACCGAATG ATTGACGTCA ACATTCGCGG CGTGCTGCAC
GGCATTGCCA CCACGCTGCC GCTCATGCAA CAACAGCACG CCGGCCAGAT TATCAATATT
GCCTCCATTG GAGCCTATGC TGTGAGCCCG ACCGCTGCGG TGTACTGCGC CACCAAATAT
GCCGTACGGG CAATTTCAGA GGGCCTGCGC CAAGAGGTGG GGGGTGACAT CCGGGTCACC
GTCATTGCAC CTGGCGTTAC CGAATCCGAA CTGGCCGAAA GCATTTCCGA TGACGGCGGG
CGTGCAGAGA TGCGCGAGTT CCGCAAGATC GCGATTCCAG CTTCGGCCAT TGCCCGAGCG
ATTGCCTATG CGGTAGAGCA GCCTGCGGAT GTCGACGTCA GCGAATTGAT CGTGCGTCCA
ACCGCAAGTC CATTCTGA
 
Protein sequence
MHGIQQKVIV ITGASSGIGE ATARLLASKG ARVVLGARRT DRLEALAKEI RSAGGTADVK 
GLDVTNLDDM QSFIDFTVEL HGRVDVLVNN AGVMPLSKLE ALKVDEWNRM IDVNIRGVLH
GIATTLPLMQ QQHAGQIINI ASIGAYAVSP TAAVYCATKY AVRAISEGLR QEVGGDIRVT
VIAPGVTESE LAESISDDGG RAEMREFRKI AIPASAIARA IAYAVEQPAD VDVSELIVRP
TASPF