Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2737 |
Symbol | |
ID | 6111688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3025502 |
End bp | 3026239 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641622524 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001749598 |
Protein GI | 170721910 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGCA TCCAACAAAA AGTCATCGTA ATTACCGGCG CCAGCAGTGG TATCGGCGAA GCGACAGCCC GCCTGCTCGC CAGCAAAGGC GCTCGCGTGG TTTTGGGTGC CCGCCGCACC GATCGCCTGG AAGCTCTGGC CAAGGAGATT CGCTCAGCAG GCGGTACCGC TGATGTAAAG GGGCTGGATG TCACCAACCT GGATGACATG CAGTCCTTCA TTGACTTCAC TGTCGAATTG CATGGCCGCG TCGACGTTCT CGTCAACAAC GCTGGAGTCA TGCCGCTCTC GAAGCTCGAA GCGCTCAAGG TCGATGAGTG GAACCGAATG ATTGACGTCA ACATTCGCGG CGTGCTGCAC GGCATTGCCA CCACGCTGCC GCTCATGCAA CAACAGCACG CCGGCCAGAT TATCAATATT GCCTCCATTG GAGCCTATGC TGTGAGCCCG ACCGCTGCGG TGTACTGCGC CACCAAATAT GCCGTACGGG CAATTTCAGA GGGCCTGCGC CAAGAGGTGG GGGGTGACAT CCGGGTCACC GTCATTGCAC CTGGCGTTAC CGAATCCGAA CTGGCCGAAA GCATTTCCGA TGACGGCGGG CGTGCAGAGA TGCGCGAGTT CCGCAAGATC GCGATTCCAG CTTCGGCCAT TGCCCGAGCG ATTGCCTATG CGGTAGAGCA GCCTGCGGAT GTCGACGTCA GCGAATTGAT CGTGCGTCCA ACCGCAAGTC CATTCTGA
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Protein sequence | MHGIQQKVIV ITGASSGIGE ATARLLASKG ARVVLGARRT DRLEALAKEI RSAGGTADVK GLDVTNLDDM QSFIDFTVEL HGRVDVLVNN AGVMPLSKLE ALKVDEWNRM IDVNIRGVLH GIATTLPLMQ QQHAGQIINI ASIGAYAVSP TAAVYCATKY AVRAISEGLR QEVGGDIRVT VIAPGVTESE LAESISDDGG RAEMREFRKI AIPASAIARA IAYAVEQPAD VDVSELIVRP TASPF
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