| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3170 |
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| Symbol | |
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| ID | 5150717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3319398 |
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| End bp | 3321032 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640558037 |
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| Product | putative Short-chain dehydrogenase/reductase |
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| Protein accession | YP_001239190 |
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| Protein GI | 148254605 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0745281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGTCGAGCG GTGACCTGCT GCTGCATTCG CCAACACGAT TTTCCCACGC CTTGCGGGAG
GAGCTGGAGC GGCTCGGTCC AATCAAATAT CTGCTCGCCC CGAACGTCGC GCATTGGATG
TTTCTTCGGG ACTGGCAGGC GGCCCTGCCG AATGCCCAAG TTTACGCCGC GCCGGGCCTT
GCGCGGCGCG CGCAGGTCCG CCGCAGCGGG CTGCGGATCG ATCGCGAACT GACCGATGTG
ACGCCGGATG CCTGGTCGCA GGATCTGCAG ATCGTGCTGA TTTCTGCGCC GCTGTTCTCG
GAGGTCGAGC TGTTCCACCG GCCCAGCCGT ACGCTCATCC TGACCGATCT CGTGCAGAAT
CTGGCCCCGG AAGGTCTCGG GGCGGTGCGG CGCACCGTGG CGCGTCTGCT CGGAATCACG
GCGCCGGACG GCAAGGCTCC GGCCTATCTG AGGTTGGTGT TGCGGCTCGG CGGCCGCGCC
GTCCGGCTTG CAGCGGCCCG GCTGATCACG CTGGCGCCCG AGCGCGTCAT CTTTGCCCAT
GGCCGCTGGT TCGATACTGG CGGCACGCAG CGATTGCGGG CCTCGCTTGG CTGGCTTCTG
GATTCTGCCC CCGAAGCGCG CAGGCTGATG CGAGATCTGC GCGGAACCCG CGTCGTGGTC
ACCGGCGCGT CCAGCGGCAT TGGCCGTGCC ACGGCGCTCG CTTTGGCACG CGAGGGTGCA
AGTGTCGTGC TGGCTGCGCG GCGCGAGAAT GTCTTGAAGG ATGTGGCGCT CGAATGCGAG
ACGCTCGGGG GCCGGGCCAT CGCCGTTGCC ACCGACGTCA CCGACGCCGA TGCGGTCAAA
CGATTGGCCG AACAGGCTGT GCGGACGTTC GGCGGCGTCG ATGTCTGGAT CAATAATGCA
GGGACCGGCG TGTTCGGTCC TTATCAAGAT GCCGATATGG CGCTGCATCG CAAGACCGTC
GAGGTGAATC TGCTCGGCAC GATGAACGGC GCCTATGCGG TGCTGCCCAT CTTCCTGCGG
CAGCGGCGGG GAACCCTGAT CAACAACATT TCGTTGGGCG GCTGGGCGCC GACACCGTTC
GCCGCGGCCT ATACGGCAAG CAAGTTCGGC CTGCGTGGCT TCTCGGCCAG CCTGCGCCAG
GAACTCACCG CTCACAAGGA TGTTCACGTC TGCAGTGTAT TTCCTGCCAT GGTGGACACG
CCCGGTTTTG TCCACGGCGC CAATGTGTCC GGCCGCACCT TGGATCCGGG GCCGCTGCTG
TATCGCCCCG AGGACGTCGC TGAGACGTTC GTGCAATTGG TTCGGACGCC GCGCGACGAG
GTCGCTGTCG GCTGGCCGGC ACGGCTCGGC CAGATTTCCT ATGCGCTGGC CCGCCGCCCG
ACCGAGCAAC TGATGAGCAC AGCGTTCCGC TTTCTGTTGT CGCGAGCCAA CAGCGCGCCG
CGCAGCACCG GCGCGGTGCT TGCACCGATC GCGGCCGGCA CTGCGGTGAG CGGCGGCTGG
CTCGGCCGCA AGAAGCTGCC GCCGGCCGGT CAACTCAGCA GGATCGGACT GGCTGTCGGC
ATCGGCGGGA TCGCATTGAT GCTGCTCGCA CGTCGTCGTC CACCGTCCGC GCCGCGCGCC
CGCGCGCACC GTTGA
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| Protein sequence | MSSGDLLLHS PTRFSHALRE ELERLGPIKY LLAPNVAHWM FLRDWQAALP NAQVYAAPGL
ARRAQVRRSG LRIDRELTDV TPDAWSQDLQ IVLISAPLFS EVELFHRPSR TLILTDLVQN
LAPEGLGAVR RTVARLLGIT APDGKAPAYL RLVLRLGGRA VRLAAARLIT LAPERVIFAH
GRWFDTGGTQ RLRASLGWLL DSAPEARRLM RDLRGTRVVV TGASSGIGRA TALALAREGA
SVVLAARREN VLKDVALECE TLGGRAIAVA TDVTDADAVK RLAEQAVRTF GGVDVWINNA
GTGVFGPYQD ADMALHRKTV EVNLLGTMNG AYAVLPIFLR QRRGTLINNI SLGGWAPTPF
AAAYTASKFG LRGFSASLRQ ELTAHKDVHV CSVFPAMVDT PGFVHGANVS GRTLDPGPLL
YRPEDVAETF VQLVRTPRDE VAVGWPARLG QISYALARRP TEQLMSTAFR FLLSRANSAP
RSTGAVLAPI AAGTAVSGGW LGRKKLPPAG QLSRIGLAVG IGGIALMLLA RRRPPSAPRA
RAHR
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