| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3968 |
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| Symbol | |
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| ID | 4674218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 4223942 |
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| End bp | 4224946 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639841010 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_988150 |
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| Protein GI | 121596254 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.223195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAG CTTTGCCCGC CAGCCCGTCC AGCGTCTTTG CGTCCTCGCC CAATCCGGTG
GTGGTGATCA CCGGCGCCTC CAGCGGTATC GGCCACGCCA CGGCGCTGGC GTTTGCGCGC
CGCGGCGCGC GCCTGGTGCT GGCCGCGCGC AACCCTGACA CGCTGGCCCC TGTGGCGCTG
GCCTGCCGCG CCGAGGGTGG GCAGGCGCTG GGCATTCCCA CCGACGTGAC CGACGCCGAC
GCGGTGCAGG CCCTGGCCGA CAAGGCGGTG CGCCACTTCG GGCGCATCGA TGTGTGGATC
AACGGCGTGG GCGTGGGAGC CGTGGGGCGC TTTGACGATG TGCCGCTGGC CGCGCACCGC
CGCGTGATCG AGTCCAACCT GCTGGGCCAC GTGCACGGCG CGCACGCGGC GCTCACGCGC
TTTCGCGCGC AGGGCCACGG CCTGCTGGTG AACCTGATCT CGCTGGGCGG CTGGGTGCCT
GCGCCCTACG CGGCCGCCTA CACGGCCAGC AAGTTCGGCC TGCGCGGCCT GTCCGAAAGC
CTGCGCGCCG AGGTGGTCGA CCTGCCCCAG GTGCATGTGT GCGACGTGGC GCCCACGTTC
GTCGATTCGC CGGGCCTGTC GCATGGCGCC AACTACACGG GCCGGCGCAT CCGCCCGCCG
CTGCCCATGG TGGACCCGCG CGCGGTGGCC CAGGCCATCG TGGACCTGGC CGGTGCGGCC
CACCCGCGCG CCGTCACCTG GCTGGGCCTG GGCGCGATGC CCGGGCGTGT GGCGCATGCG
CTGGCGCCGC AGGGCACGGC GCGCGCCATG CGCTGGTTCA GCGACCTGGG GCTGCGCCGG
GCAGCGCCCG CGCCGCTCAC CCAAGGCAAT CTGTTTGCCC CCTCGCACCA GACCTCCATC
GACGGCGGCC ACCGCCAGCG CATGGCGGGA TCGGCCACGG TGGTGACGGT GCTCGGTGTG
GTCGGCCTGG CGGTGGGTTG GTGGTGGGGA CGCGGACGGC GCTGA
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| Protein sequence | MTTALPASPS SVFASSPNPV VVITGASSGI GHATALAFAR RGARLVLAAR NPDTLAPVAL
ACRAEGGQAL GIPTDVTDAD AVQALADKAV RHFGRIDVWI NGVGVGAVGR FDDVPLAAHR
RVIESNLLGH VHGAHAALTR FRAQGHGLLV NLISLGGWVP APYAAAYTAS KFGLRGLSES
LRAEVVDLPQ VHVCDVAPTF VDSPGLSHGA NYTGRRIRPP LPMVDPRAVA QAIVDLAGAA
HPRAVTWLGL GAMPGRVAHA LAPQGTARAM RWFSDLGLRR AAPAPLTQGN LFAPSHQTSI
DGGHRQRMAG SATVVTVLGV VGLAVGWWWG RGRR
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