More than 300 homologs were found in PanDaTox collection
for query gene Cphy_2571 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_2571  binding-protein-dependent transport systems inner membrane component  100 
 
 
321 aa  652    Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0144  binding-protein-dependent transport systems inner membrane component  48.57 
 
 
333 aa  313  1.9999999999999998e-84  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2339  ABC transporter, permease protein  49.51 
 
 
322 aa  304  2.0000000000000002e-81  Clostridium perfringens ATCC 13124  Bacteria  normal  0.552195  n/a   
 
 
-
 
NC_008262  CPR_2051  sugar transport system (permease) (binding protein dependent transporter)  49.18 
 
 
308 aa  302  5.000000000000001e-81  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0595  binding-protein-dependent transport systems inner membrane component  48.55 
 
 
313 aa  282  5.000000000000001e-75  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1715  binding-protein-dependent transport systems inner membrane component  43.63 
 
 
316 aa  275  1.0000000000000001e-72  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1709  binding-protein-dependent transport systems inner membrane component  44.74 
 
 
307 aa  244  1.9999999999999999e-63  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0695  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
288 aa  207  2e-52  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000207262  n/a   
 
 
-
 
NC_011898  Ccel_0946  binding-protein-dependent transport systems inner membrane component  35.78 
 
 
322 aa  183  4.0000000000000006e-45  Clostridium cellulolyticum H10  Bacteria  normal  0.0463053  n/a   
 
 
-
 
NC_012034  Athe_0085  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
318 aa  172  9e-42  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0126141  n/a   
 
 
-
 
NC_011898  Ccel_1253  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
300 aa  167  2.9999999999999998e-40  Clostridium cellulolyticum H10  Bacteria  normal  0.601892  n/a   
 
 
-
 
NC_010001  Cphy_0773  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
311 aa  166  4e-40  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000000374508  n/a   
 
 
-
 
NC_013411  GYMC61_2708  binding-protein-dependent transport systems inner membrane component  32.66 
 
 
315 aa  164  3e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0860  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
313 aa  162  6e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0929  binding-protein-dependent transport systems inner membrane component  32.32 
 
 
330 aa  161  1e-38  Clostridium phytofermentans ISDg  Bacteria  normal  0.293677  n/a   
 
 
-
 
NC_012034  Athe_2553  binding-protein-dependent transport systems inner membrane component  32.69 
 
 
308 aa  160  2e-38  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.336984  n/a   
 
 
-
 
NC_011898  Ccel_0143  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
318 aa  158  1e-37  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29230  ABC-type polysaccharide transport system, permease component  32.67 
 
 
334 aa  157  2e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2031  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
315 aa  157  2e-37  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0151  binding-protein-dependent transport systems inner membrane component  28.81 
 
 
323 aa  155  6e-37  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0121  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
298 aa  155  1e-36  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0281  binding-protein-dependent transport systems inner membrane component  30.18 
 
 
315 aa  152  7e-36  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.949472 
 
 
-
 
NC_010001  Cphy_0339  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
333 aa  152  8e-36  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02840  ABC-type polysaccharide transport system, permease component  31.85 
 
 
324 aa  152  8.999999999999999e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.840845  normal 
 
 
-
 
NC_012034  Athe_2331  binding-protein-dependent transport systems inner membrane component  32 
 
 
317 aa  150  2e-35  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2093  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
321 aa  150  3e-35  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000858649  n/a   
 
 
-
 
NC_010001  Cphy_3569  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
324 aa  150  3e-35  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3209  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
319 aa  150  3e-35  Clostridium phytofermentans ISDg  Bacteria  normal  0.24552  n/a   
 
 
-
 
NC_012669  Bcav_4041  binding-protein-dependent transport systems inner membrane component  29.77 
 
 
330 aa  147  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2660  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
335 aa  147  2.0000000000000003e-34  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.245622  n/a   
 
 
-
 
NC_013526  Tter_1992  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
327 aa  147  3e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0664  binding-protein-dependent transport systems inner membrane component  30.87 
 
 
324 aa  146  4.0000000000000006e-34  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.00000000161767  n/a   
 
 
-
 
NC_008527  LACR_0761  ABC-type polysaccharide transport system, permease component  30.46 
 
 
316 aa  145  1e-33  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.000797199  n/a   
 
 
-
 
NC_012669  Bcav_1581  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
305 aa  145  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.595775  normal 
 
 
-
 
NC_011661  Dtur_0312  binding-protein-dependent transport systems inner membrane component  29.43 
 
 
304 aa  144  2e-33  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3242  binding-protein-dependent transport systems inner membrane component  31.1 
 
 
310 aa  144  2e-33  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3315  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
324 aa  143  4e-33  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0059  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
320 aa  142  5e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.542171  normal  0.242962 
 
 
-
 
NC_008541  Arth_0428  binding-protein-dependent transport systems inner membrane component  30 
 
 
326 aa  143  5e-33  Arthrobacter sp. FB24  Bacteria  normal  0.278038  n/a   
 
 
-
 
NC_013172  Bfae_17870  ABC-type polysaccharide transport system, permease component  32 
 
 
327 aa  142  6e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  0.246834  n/a   
 
 
-
 
NC_013525  Tter_1103  binding-protein-dependent transport systems inner membrane component  28.48 
 
 
323 aa  142  7e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_2805  binding-protein-dependent transport systems inner membrane component  30 
 
 
339 aa  142  8e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0077711 
 
 
-
 
NC_012034  Athe_2054  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
304 aa  142  9.999999999999999e-33  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_04190  ABC-type polysaccharide transport system, permease component  29.49 
 
 
313 aa  140  1.9999999999999998e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6722  binding-protein-dependent transport systems inner membrane component  29.61 
 
 
350 aa  141  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.14041  normal 
 
 
-
 
NC_010001  Cphy_1119  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
318 aa  140  3e-32  Clostridium phytofermentans ISDg  Bacteria  normal  0.0757482  n/a   
 
 
-
 
NC_012034  Athe_0850  binding-protein-dependent transport systems inner membrane component  30.62 
 
 
312 aa  140  3.9999999999999997e-32  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.3931  n/a   
 
 
-
 
NC_010001  Cphy_2656  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
315 aa  139  4.999999999999999e-32  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5564  binding-protein-dependent transport systems inner membrane component  28.38 
 
 
346 aa  139  7e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.271716  normal  0.315175 
 
 
-
 
NC_013530  Xcel_2785  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
351 aa  139  7e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3113  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
325 aa  137  2e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_20490  ABC-type polysaccharide transport system, permease component  30.69 
 
 
326 aa  137  2e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.086583  normal  0.344725 
 
 
-
 
NC_014165  Tbis_1563  binding-protein-dependent transporter inner membrane component  31.12 
 
 
331 aa  137  2e-31  Thermobispora bispora DSM 43833  Bacteria  normal  0.117544  normal 
 
 
-
 
NC_013131  Caci_0128  binding-protein-dependent transport systems inner membrane component  29.71 
 
 
319 aa  137  4e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1981  binding-protein-dependent transport systems inner membrane component  28.12 
 
 
332 aa  136  6.0000000000000005e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.837533  n/a   
 
 
-
 
NC_010001  Cphy_2732  binding-protein-dependent transport systems inner membrane component  31.08 
 
 
316 aa  135  8e-31  Clostridium phytofermentans ISDg  Bacteria  normal  0.0340422  n/a   
 
 
-
 
NC_007333  Tfu_1610  putative transport system integral membrane protein  29.17 
 
 
341 aa  135  9.999999999999999e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_01640  ABC-type polysaccharide transport system, permease component  28.76 
 
 
324 aa  135  9.999999999999999e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0485  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
326 aa  135  9.999999999999999e-31  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0367  binding-protein-dependent transport systems inner membrane component  30.1 
 
 
332 aa  132  6e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_33150  ABC-type polysaccharide transport system, permease component  27.94 
 
 
336 aa  132  6e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.96599 
 
 
-
 
NC_012669  Bcav_3325  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
334 aa  132  6.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.491227  normal  0.0603947 
 
 
-
 
NC_012669  Bcav_1872  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
326 aa  132  1.0000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.095702  normal  0.124231 
 
 
-
 
NC_010001  Cphy_1916  binding-protein-dependent transport systems inner membrane component  28.97 
 
 
320 aa  131  2.0000000000000002e-29  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000481644  n/a   
 
 
-
 
NC_013131  Caci_4681  binding-protein-dependent transport systems inner membrane component  27.16 
 
 
310 aa  129  5.0000000000000004e-29  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00295974  normal  0.937314 
 
 
-
 
NC_013595  Sros_1292  transmembrane lipoprotein  27.56 
 
 
340 aa  129  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.817448 
 
 
-
 
NC_010001  Cphy_2192  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
307 aa  128  1.0000000000000001e-28  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4937  binding-protein-dependent transport systems inner membrane component  27.33 
 
 
339 aa  127  2.0000000000000002e-28  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00187301  normal 
 
 
-
 
NC_013174  Jden_2401  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
340 aa  127  3e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0135356  normal 
 
 
-
 
NC_013530  Xcel_1190  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
292 aa  125  1e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0859971  n/a   
 
 
-
 
NC_010001  Cphy_0393  binding-protein-dependent transport systems inner membrane component  27.86 
 
 
326 aa  125  1e-27  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1014  binding-protein-dependent transport systems inner membrane component  30 
 
 
323 aa  124  2e-27  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3386  binding-protein-dependent transport systems inner membrane component  27.07 
 
 
332 aa  124  2e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3000  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
328 aa  120  3e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.999287 
 
 
-
 
NC_013093  Amir_2171  binding-protein-dependent transport systems inner membrane component  27.59 
 
 
324 aa  119  4.9999999999999996e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3819  binding-protein-dependent transport systems inner membrane component  27.11 
 
 
322 aa  117  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.595689  normal  0.292651 
 
 
-
 
NC_009664  Krad_0410  binding-protein-dependent transport systems inner membrane component  28.08 
 
 
331 aa  117  1.9999999999999998e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0705285 
 
 
-
 
NC_012669  Bcav_1320  binding-protein-dependent transport systems inner membrane component  26.93 
 
 
327 aa  115  1.0000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_05740  ABC-type polysaccharide transport system, permease component  31 
 
 
346 aa  114  2.0000000000000002e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.767315  normal 
 
 
-
 
NC_013174  Jden_1768  binding-protein-dependent transport systems inner membrane component  26.8 
 
 
320 aa  112  6e-24  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0555688  normal  0.200854 
 
 
-
 
NC_011898  Ccel_2456  binding-protein-dependent transport systems inner membrane component  27.65 
 
 
316 aa  112  7.000000000000001e-24  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5753  binding-protein-dependent transport systems inner membrane component  28.37 
 
 
329 aa  112  1.0000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.623467  normal 
 
 
-
 
NC_012669  Bcav_1438  binding-protein-dependent transport systems inner membrane component  29.29 
 
 
335 aa  110  2.0000000000000002e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.650576  normal 
 
 
-
 
NC_013521  Sked_10090  ABC-type polysaccharide transport system, permease component  25.71 
 
 
331 aa  110  4.0000000000000004e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1547  binding-protein-dependent transport systems inner membrane component  28.66 
 
 
478 aa  107  3e-22  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000265018  n/a   
 
 
-
 
NC_013172  Bfae_13600  ABC-type polysaccharide transport system, permease component  26.77 
 
 
332 aa  105  1e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  0.248364  n/a   
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  28.14 
 
 
317 aa  100  3e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
296 aa  100  4e-20  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  30.8 
 
 
317 aa  98.6  1e-19  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
299 aa  96.3  6e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  28.67 
 
 
287 aa  94.4  2e-18  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0144  binding-protein-dependent transport systems inner membrane component  30.37 
 
 
295 aa  92.8  7e-18  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
324 aa  92.4  9e-18  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_013131  Caci_3702  binding-protein-dependent transport systems inner membrane component  26.75 
 
 
327 aa  91.7  1e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.042733  normal 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  27.41 
 
 
309 aa  91.3  2e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_010159  YpAngola_A4017  carbohydrate ABC transporter permease  25.61 
 
 
294 aa  89.4  7e-17  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  30.74 
 
 
311 aa  89.7  7e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010465  YPK_3708  binding-protein-dependent transport systems inner membrane component  25.61 
 
 
294 aa  89.4  7e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3574  carbohydrate ABC transporter permease  25.61 
 
 
294 aa  89.4  7e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  31.28 
 
 
305 aa  89.4  7e-17  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
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