Gene Sros_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1292 
Symbol 
ID8664567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1332474 
End bp1333496 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID 
Producttransmembrane lipoprotein 
Protein accessionYP_003337033 
Protein GI271962837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.817448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTAGGG ACTCCGTGAA CACCGGACCG GCGGGTGACC TGACCTCACC CGCCGGCGCC 
GGCACCACCA AGGATGGCGG CAAGGCGGCG GTGCGGACAA GCAGAGCCCG CCGCGGTCCT
CTCCGGACCC GGCTGAGGCG TGACTGGCAA CTGCTGCTGA TGGCGCTGCC CGCCGTCGGC
CTGCTGATCG TGTTCCACTA CGTTCCGCTG CTCGGCAACG TCATCGCCTT CCAGGACTAC
TCGCCCTACG TGGGCATCGC CGACAGCCCC TGGGCCGGTC TGTCCAACTT CCACTGGCTG
CTGTTCGACG AGAGCATGTG GGACGCGACG CTCAACACCC TGTCGATCAC CACCTTCCAG
CTGATCTTCT ACTTCCCCGT GCCGATCATG CTGGCCGTCC TCCTCGACAG CGTGGTACGG
CCCCGCCTGC GCCTGTTCAT CCAGGGCATC GTCTACCTGC CGCACTTCTT CTCGTGGGTG
CTGGTCGTCA CGCTGTTCCA GCAGATGTTC GGCGGCGCCG GCCTGCTCTC ACAGACGCTG
CGGGAGCACG GGTACGACGG CTTCGACCTG ATGACCAATC CGGACACCTT CATCGCGCTG
GTGACCGCCG AGACGATCTG GAAGGACGCC GGCTGGGGGA CGATCATCTT CCTGGCCGCG
CTGGCGGCCA TCAACCAGAA CCTCTACGAG GCGGCGGCGG TGGACGGCGC CTCGCGCTGG
CGGCGGCTGT GGCACATCAC GCTGCCCGGC CTGCGCCCGG TGATCATCCT GCTGCTGATC
CTGCGCCTGG GCGAGGCGCT GAACGTCGGC TTCGAGCAGT TCTTCCTGCA GCGCGACGCG
GTCGGCAGGG ACGCCGCCGA GGTGCTGGAC ACCTTCATCT ACTGGCGCAC GCTGCTGACC
GGCGAGTGGA GCTACGGCGC GGCCGCCGGC CTGGTCAAGG GCCTGGTGGG ACTGGTCCTG
ATCCTCATAG CCAACAAGGT CGCCCACAGA TTCGGCGAGC AGGGAATCTA CAAACGATCA
TGA
 
Protein sequence
MLRDSVNTGP AGDLTSPAGA GTTKDGGKAA VRTSRARRGP LRTRLRRDWQ LLLMALPAVG 
LLIVFHYVPL LGNVIAFQDY SPYVGIADSP WAGLSNFHWL LFDESMWDAT LNTLSITTFQ
LIFYFPVPIM LAVLLDSVVR PRLRLFIQGI VYLPHFFSWV LVVTLFQQMF GGAGLLSQTL
REHGYDGFDL MTNPDTFIAL VTAETIWKDA GWGTIIFLAA LAAINQNLYE AAAVDGASRW
RRLWHITLPG LRPVIILLLI LRLGEALNVG FEQFFLQRDA VGRDAAEVLD TFIYWRTLLT
GEWSYGAAAG LVKGLVGLVL ILIANKVAHR FGEQGIYKRS