Gene Bfae_29230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_29230 
Symbol 
ID8401467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp3296689 
End bp3297693 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID644998955 
ProductABC-type polysaccharide transport system, permease component 
Protein accessionYP_003156274 
Protein GI257070019 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4209] ABC-type polysaccharide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGCTG ACCCCGTCAT CGACACCAGC GCGACCGCGC CTCGGCTCGA TTCCCCGGAG 
CCCGAGCCCG CGACGAGCCC CGCACCCGTG GCACGGCGCC GCAGGGGAGT GGCCGCGACG 
CTGTGGAAGC ACCGTGCCCT CTACCTGATG GCGCTGCCGG GCATCGTCTA TTTCCTGCTG 
TTCAAGTACC TGCCCATGGG CGGGCTGATC ATCTCGTTCC AGGACTACAA GCCGTTCCTG 
GGGATCATGG GCAGCCCGTG GGTGGGCTTC GAGCACTTCG TGCGCCTGTT CACGCAGGAC 
ACCTTCTTCA TGCTGCTGCG GAACACGCTC GTGCTCTCGC TGCTGCTGAT GCTCATCTCG 
TTCCCGATCC CGATCGTGCT CGCCCTGCTG CTGAACGAGC TGCGCGGGGT CGTGTTCAAG 
CGCAGCATCC AGACGGTCAT CTACCTGCCG CACTTCATGT CGTGGGTGAT CGTGGTGTCG 
CTGTTCTACG TGATGCTCAC GACCGACGGC GGCGCGATCA ACAACCTCAT CGTCTCCCTC 
GGCGGGGACC CGATCGGCTT CCTCACCGAC TCCGAATGGC TCCGCCCGAT GTACGTCTTC 
CAGCACGTGT GGCGCACTGC CGGCTGGGGC ACGATCGTCT ACCTCGCGGC GCTGACCGCC 
GTGGACATGG CCCTGTACGA GGCCTCGGAG ATCGACGGCG CCAACCGCTG GCAGCAGACC 
TGGCACATCA CCCTGCCGGC GATCCGGCCC ACCATCATCG TGCTGTTCAT CCTCTCGATC 
GGCGACTTCC TCGAGCTCGG CTTCGAGCAC ATGTTCCTGC TGCTGAACTC GATGAACCGC 
GACGTCGGCG AAATCTTCGA CACCTTCGTG TACACCGCCG GCATCCAGAA CGGCCAGCTC 
AGCTTCGCCA CCGCGGTGGG CCTGTTCAAG GGCCTCGTCG GCCTGGTCCT CGTGATCGGG 
GCGAACTCCC TGGCCAAGCG CTTCGGCGAA GAGGGCGTGT ACTGA
 
Protein sequence
MVADPVIDTS ATAPRLDSPE PEPATSPAPV ARRRRGVAAT LWKHRALYLM ALPGIVYFLL 
FKYLPMGGLI ISFQDYKPFL GIMGSPWVGF EHFVRLFTQD TFFMLLRNTL VLSLLLMLIS 
FPIPIVLALL LNELRGVVFK RSIQTVIYLP HFMSWVIVVS LFYVMLTTDG GAINNLIVSL 
GGDPIGFLTD SEWLRPMYVF QHVWRTAGWG TIVYLAALTA VDMALYEASE IDGANRWQQT 
WHITLPAIRP TIIVLFILSI GDFLELGFEH MFLLLNSMNR DVGEIFDTFV YTAGIQNGQL 
SFATAVGLFK GLVGLVLVIG ANSLAKRFGE EGVY