More than 300 homologs were found in PanDaTox collection
for query gene MCA1942 on replicon NC_002977
Organism: Methylococcus capsulatus str. Bath



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002977  MCA1942  sugar ABC transporter, permease protein  100 
 
 
287 aa  564  1e-160  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  57.86 
 
 
293 aa  332  4e-90  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  57.14 
 
 
293 aa  326  2.0000000000000001e-88  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  59.03 
 
 
293 aa  320  1.9999999999999998e-86  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  57.93 
 
 
294 aa  314  9.999999999999999e-85  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  56.47 
 
 
294 aa  307  1.0000000000000001e-82  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  48.39 
 
 
291 aa  274  1.0000000000000001e-72  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  44.84 
 
 
317 aa  233  2.0000000000000002e-60  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  47.53 
 
 
314 aa  233  2.0000000000000002e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  47.23 
 
 
353 aa  233  3e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  45.09 
 
 
317 aa  232  4.0000000000000004e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  42.59 
 
 
299 aa  228  7e-59  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  44.6 
 
 
288 aa  224  9e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  43.23 
 
 
309 aa  223  2e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  45.13 
 
 
307 aa  222  7e-57  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  45.13 
 
 
307 aa  222  7e-57  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  41.64 
 
 
309 aa  219  5e-56  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  42.65 
 
 
306 aa  216  2e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  40.96 
 
 
310 aa  217  2e-55  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  44.74 
 
 
306 aa  213  3.9999999999999995e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0513  binding-protein-dependent transport systems inner membrane component  46.62 
 
 
314 aa  212  4.9999999999999996e-54  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  43.84 
 
 
316 aa  211  1e-53  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
308 aa  210  2e-53  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  40.99 
 
 
295 aa  210  3e-53  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  41.99 
 
 
309 aa  209  4e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  44.91 
 
 
322 aa  209  4e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  38.91 
 
 
311 aa  209  6e-53  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  41.03 
 
 
320 aa  209  6e-53  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  41.11 
 
 
308 aa  208  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
305 aa  207  2e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
296 aa  207  2e-52  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  43.01 
 
 
306 aa  206  5e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  43.75 
 
 
319 aa  205  6e-52  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
NC_013526  Tter_2024  binding-protein-dependent transport systems inner membrane component  41.76 
 
 
303 aa  204  2e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000249122  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  43.03 
 
 
294 aa  204  2e-51  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  43.4 
 
 
317 aa  204  2e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
320 aa  202  5e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
298 aa  202  5e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  40.78 
 
 
305 aa  202  5e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  40.55 
 
 
307 aa  202  7e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011371  Rleg2_6525  binding-protein-dependent transport systems inner membrane component  40.99 
 
 
286 aa  202  8e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.728774  normal  0.302995 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  41.06 
 
 
313 aa  201  9e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6113  binding-protein-dependent transport systems inner membrane component  40.71 
 
 
286 aa  201  9.999999999999999e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.453278  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  40.14 
 
 
292 aa  201  9.999999999999999e-51  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  41.13 
 
 
317 aa  201  9.999999999999999e-51  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_012028  Hlac_2863  binding-protein-dependent transport systems inner membrane component  42.6 
 
 
356 aa  200  1.9999999999999998e-50  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  44.24 
 
 
316 aa  200  1.9999999999999998e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  35.09 
 
 
311 aa  200  1.9999999999999998e-50  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  45.1 
 
 
312 aa  199  3.9999999999999996e-50  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  41.76 
 
 
306 aa  199  3.9999999999999996e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  43.38 
 
 
300 aa  199  5e-50  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  43.31 
 
 
294 aa  198  1.0000000000000001e-49  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  41.22 
 
 
312 aa  197  2.0000000000000003e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
295 aa  197  2.0000000000000003e-49  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
299 aa  197  2.0000000000000003e-49  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
311 aa  196  3e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  42.18 
 
 
314 aa  196  5.000000000000001e-49  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  41.33 
 
 
305 aa  194  1e-48  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  33.81 
 
 
296 aa  194  1e-48  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  42.05 
 
 
315 aa  193  2e-48  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  42.7 
 
 
321 aa  193  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  39.72 
 
 
306 aa  194  2e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  41.51 
 
 
319 aa  192  4e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  40.49 
 
 
300 aa  192  4e-48  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
309 aa  192  4e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  39.55 
 
 
294 aa  192  5e-48  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
316 aa  192  7e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  45.95 
 
 
311 aa  192  8e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
315 aa  191  9e-48  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  40.61 
 
 
297 aa  191  1e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  40.15 
 
 
321 aa  191  1e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
313 aa  191  1e-47  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  38.93 
 
 
321 aa  191  1e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  38.65 
 
 
318 aa  191  2e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  41.52 
 
 
307 aa  189  2.9999999999999997e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  42.91 
 
 
290 aa  190  2.9999999999999997e-47  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
316 aa  189  4e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
318 aa  189  5e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  36.54 
 
 
314 aa  189  5.999999999999999e-47  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  36.54 
 
 
314 aa  189  5.999999999999999e-47  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
308 aa  188  8e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012917  PC1_0737  binding-protein-dependent transport systems inner membrane component  39.36 
 
 
293 aa  187  1e-46  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  39.46 
 
 
300 aa  188  1e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
326 aa  188  1e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
293 aa  188  1e-46  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2484  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
318 aa  187  1e-46  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.575298  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  40.2 
 
 
415 aa  188  1e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  38.64 
 
 
288 aa  188  1e-46  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  41.92 
 
 
307 aa  187  1e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  37.64 
 
 
310 aa  187  2e-46  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  37.64 
 
 
310 aa  187  2e-46  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0973  binding-protein-dependent transport systems inner membrane component  39.36 
 
 
293 aa  187  2e-46  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  38.02 
 
 
310 aa  186  3e-46  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  38.02 
 
 
310 aa  186  3e-46  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  38.02 
 
 
310 aa  187  3e-46  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
292 aa  186  3e-46  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  38.95 
 
 
318 aa  186  3e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_012669  Bcav_3983  binding-protein-dependent transport systems inner membrane component  39.7 
 
 
302 aa  187  3e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.159905  normal 
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
420 aa  186  4e-46  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  38.02 
 
 
310 aa  186  4e-46  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
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