Gene TRQ2_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0339 
Symbol 
ID6091743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp321610 
End bp322872 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content50% 
IMG OID642487516 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001738378 
Protein GI170288140 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCT CGAAGAAGCT GAGAGAAGCG GTTCTTGCGT ACCTCTTTCT TCTTCCGTCA 
CTTGTGATCC TTGGGATGTT CGTCTTCTGG CCAGTTGGAT TCTCTTTCGT TCTGAGCTTC
TTCAAGTGGG ACTTCAGGAA CATGAAGAAT CCCTACTTCA CGGGTCTTGA CAACTACATC
GAGATCTTCA AGTTCGACTA CCCGCCGAAG TACTCTTTCG TCTTCACCGT TTTGAACACC
TTCTTTCACC TTGCGGTTGC CGGCGCGATC GTGATGCTGA TCGTCCACCT GATCAAGAAA
AGAACCCTCT CAGGTATCAT CTCCAACGCC GCTGTAGTAC TGGTTTACAT CGTTTTGAAC
CTCTTCAACG TGGAAAATCC TATCCTCTCC TTCCTGATTG CGGCTATCTC TTGGAGCTGG
CTGGTGTACG ACTTCAAGCG AGTGGAGTTC AAGAACACCT GGTTCTGGTT CATTCTGTTT
CTTGCGGTCT TCGTTTTCGT GGAGCTGAAC TCGTCTCTTC CGGGACTTGT GAACTTTTTG
CTCGACGCGA AGGACAAGAA TCTCTTCCTG AAGGCGCTCA CCAACACGCT GTACTACGTG
ATACTGAGTG TGCCTTCACA GATCTTCCTT TCTCTCATGA TCGCTCTTCT TCTGAACAGC
AACGTGAAGT TCAGGGTGTT CTTCAGGACC GCCTACTTCA TACCCTTCGT CACATCAGTT
GTGGCCATAT CCCTCGTCTG GAAGTGGATC TTCAACGACG AATTCGGTCT TTTGAACTAC
ATCCTCTCTC TGTTCAACAT AGAACCCATC TCCTGGCTGA AAGACGAAAG ATGGACCATT
CCCACGATAG CCATCGTCTC CGTCTGGAAG ACCGTCGGGT ACGATGCGGT GATCTTCCTT
GCGGGGCTCC AGAACATAGA CAGGTCTTAC TACGAAGCGG CGGAGGTGGA TGGTGCGAGT
TCTTTGCAGA AGTTCTTCTA CATCACCTGG CCGCTTTTGT CGCCGACGAC CTTCTTCCTG
CTCATAGTTT CCCTAATAGG AGCCTTCAAG GTCTTTGCGG AAGTCTACGT TCTCTACGAT
GGACTTCCGG GACCGTACAA CAACAGCGGT ATGACGCTCG TGTACTACGT GTTCGACCTG
TTCTACAGAC AGCAGAGAAT GGGAATTGCC TCGGCGGCGG CCTACATCCT CTTTGCGATC
ATTCTGATAT TCACCTTCAT CCAGTACAGA GTTGGGAGAA GAGCGGTCGA ATATGTCTCG
TGA
 
Protein sequence
MKPSKKLREA VLAYLFLLPS LVILGMFVFW PVGFSFVLSF FKWDFRNMKN PYFTGLDNYI 
EIFKFDYPPK YSFVFTVLNT FFHLAVAGAI VMLIVHLIKK RTLSGIISNA AVVLVYIVLN
LFNVENPILS FLIAAISWSW LVYDFKRVEF KNTWFWFILF LAVFVFVELN SSLPGLVNFL
LDAKDKNLFL KALTNTLYYV ILSVPSQIFL SLMIALLLNS NVKFRVFFRT AYFIPFVTSV
VAISLVWKWI FNDEFGLLNY ILSLFNIEPI SWLKDERWTI PTIAIVSVWK TVGYDAVIFL
AGLQNIDRSY YEAAEVDGAS SLQKFFYITW PLLSPTTFFL LIVSLIGAFK VFAEVYVLYD
GLPGPYNNSG MTLVYYVFDL FYRQQRMGIA SAAAYILFAI ILIFTFIQYR VGRRAVEYVS