More than 300 homologs were found in PanDaTox collection
for query gene TBFG_12077 on replicon NC_009565
Organism: Mycobacterium tuberculosis F11



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  100 
 
 
300 aa  593  1e-168  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  41.38 
 
 
321 aa  216  2.9999999999999998e-55  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  36.58 
 
 
314 aa  216  4e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
305 aa  208  8e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  39.74 
 
 
309 aa  208  1e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
316 aa  207  2e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  40.83 
 
 
305 aa  203  3e-51  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
292 aa  202  8e-51  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
313 aa  201  9e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
321 aa  201  9e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  41.52 
 
 
316 aa  201  9.999999999999999e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
309 aa  199  3.9999999999999996e-50  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
309 aa  197  1.0000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  36.71 
 
 
299 aa  197  2.0000000000000003e-49  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  39.79 
 
 
317 aa  196  3e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
316 aa  196  3e-49  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  38.51 
 
 
317 aa  196  3e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  36.71 
 
 
305 aa  195  8.000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
293 aa  195  8.000000000000001e-49  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  40 
 
 
307 aa  194  1e-48  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  40 
 
 
307 aa  194  1e-48  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
298 aa  193  2e-48  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  33.56 
 
 
315 aa  193  3e-48  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  38.41 
 
 
313 aa  192  4e-48  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  36.62 
 
 
315 aa  192  4e-48  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  38.28 
 
 
309 aa  192  8e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  38.54 
 
 
288 aa  192  8e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  39.72 
 
 
318 aa  191  1e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
306 aa  191  1e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
296 aa  189  5e-47  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  39.79 
 
 
317 aa  189  5.999999999999999e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
296 aa  189  5.999999999999999e-47  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
305 aa  188  1e-46  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  38.51 
 
 
318 aa  188  1e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
292 aa  187  2e-46  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
300 aa  187  2e-46  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  37.11 
 
 
296 aa  186  3e-46  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  40.49 
 
 
287 aa  186  5e-46  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  40.07 
 
 
320 aa  186  6e-46  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
308 aa  185  9e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
306 aa  184  1.0000000000000001e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  38.77 
 
 
293 aa  184  1.0000000000000001e-45  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
299 aa  184  2.0000000000000003e-45  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  39.58 
 
 
314 aa  182  5.0000000000000004e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  35.61 
 
 
301 aa  182  8.000000000000001e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  38.36 
 
 
294 aa  181  9.000000000000001e-45  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  38.04 
 
 
296 aa  181  1e-44  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
307 aa  181  1e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
324 aa  180  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
295 aa  181  2e-44  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
295 aa  181  2e-44  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
299 aa  181  2e-44  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  42.15 
 
 
306 aa  180  2.9999999999999997e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  36.96 
 
 
314 aa  179  4.999999999999999e-44  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  36.96 
 
 
314 aa  179  4.999999999999999e-44  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
308 aa  179  5.999999999999999e-44  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
296 aa  179  7e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
307 aa  178  8e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  36.33 
 
 
321 aa  178  8e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
292 aa  177  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
296 aa  177  1e-43  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  34.38 
 
 
310 aa  177  2e-43  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
319 aa  177  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  34.72 
 
 
310 aa  177  2e-43  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  34.38 
 
 
310 aa  177  2e-43  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
317 aa  177  2e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  34.6 
 
 
310 aa  177  2e-43  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  34.38 
 
 
310 aa  176  3e-43  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  34.38 
 
 
310 aa  177  3e-43  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
316 aa  177  3e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
310 aa  176  4e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
307 aa  176  5e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  34.38 
 
 
310 aa  176  6e-43  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
308 aa  176  6e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  35.4 
 
 
296 aa  175  7e-43  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  37.15 
 
 
292 aa  175  7e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  35.4 
 
 
296 aa  175  7e-43  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  34.81 
 
 
320 aa  175  8e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  34.03 
 
 
310 aa  174  9.999999999999999e-43  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  34.03 
 
 
310 aa  174  9.999999999999999e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  38.01 
 
 
306 aa  174  9.999999999999999e-43  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
331 aa  175  9.999999999999999e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
318 aa  174  1.9999999999999998e-42  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  37.91 
 
 
296 aa  174  1.9999999999999998e-42  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
316 aa  173  2.9999999999999996e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  34.68 
 
 
316 aa  173  2.9999999999999996e-42  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  35.31 
 
 
310 aa  172  3.9999999999999995e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  37.05 
 
 
325 aa  173  3.9999999999999995e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  35.05 
 
 
296 aa  172  3.9999999999999995e-42  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
318 aa  172  6.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
297 aa  172  6.999999999999999e-42  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4568  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
352 aa  172  7.999999999999999e-42  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  36.98 
 
 
291 aa  172  9e-42  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
310 aa  171  1e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  37.15 
 
 
318 aa  171  2e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
283 aa  170  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
319 aa  170  3e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  38.46 
 
 
311 aa  170  3e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_012669  Bcav_3614  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
287 aa  169  5e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.484603  normal  0.727796 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
310 aa  169  5e-41  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
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