| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0563 |
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| Symbol | |
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| ID | 3682257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 707969 |
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| End bp | 708853 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637715891 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_321082 |
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| Protein GI | 75906786 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.22835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0558608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAA TATCCACTAA GTCATGGTTA GACAATGATA CATTCGCCGC TTGGACTTTT
CTTGCCCCGG CTGTAATTTT GTTGGGTTTA TTTGTCCTGT GGCCTATTGC CTATCTGTTT
TATCTAAGCT TTACTGCTGG TAGTTTCACT TCCACAGGTA CATATTGGGT AGGTTTCAAG
AACTACTGGC GATTGTTACT TAACCCTGAT TTTTGGCAAG TTATTGGCAA CACCGTCTAC
TTTACCGTAG CTTCTGTAAT CCCCAGCTTA GTGATTCCCT TGGGGCTGGC AGTTTTATTG
AACCGTTCTA TGGCCTTGCG GGGGGTGCTA CGTAGTGCCT ATTTTCTGCC ATCAATTATT
TCTCTGGTTG CTGCTGGGTT AGGCTTTCGT TGGTTGTTTC AAACCTCTGG CCCGGTAAAC
GCATTTTTAA ATATATTTGG CATCCCAGCA ATTTCTTGGT TAGGCGATAC ATTTTGGGCA
ATGCCTGTAC TAATTATTTT AAGTATTTGG AAACAACTAG GGTTTAATAT GGTGGTGTTC
TTGGCAGGAT TGCAAGCCAT TCCCCCCAGT CGCTACGAAG CCGCAGAATT AGATGGTGCC
AATGGTTGGC GACAATTTTG GCATATCACC CTACCAGGAT TAAGACCTAC TTTAATCTTT
GCCACTGTCA CCACGGCTAT TTTCACATTG CGGAGTTTTG AGCAAGTTTA CGTAATGACC
GGTGGAGGCC CCTTAAATAC AACCAACTTA CTGGTTTACT ACATTTACCA AGAAGCTTTC
GGACAATTCG ATTTTGGTTA CGCTGCCGCC GCCGCAACAG TACTGTTAGC TATGGCTTTG
GTTCTTGTGT ATTTACAATT GCGTACTTGG GAAGAGGAAG TATGA
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| Protein sequence | MPKISTKSWL DNDTFAAWTF LAPAVILLGL FVLWPIAYLF YLSFTAGSFT STGTYWVGFK
NYWRLLLNPD FWQVIGNTVY FTVASVIPSL VIPLGLAVLL NRSMALRGVL RSAYFLPSII
SLVAAGLGFR WLFQTSGPVN AFLNIFGIPA ISWLGDTFWA MPVLIILSIW KQLGFNMVVF
LAGLQAIPPS RYEAAELDGA NGWRQFWHIT LPGLRPTLIF ATVTTAIFTL RSFEQVYVMT
GGGPLNTTNL LVYYIYQEAF GQFDFGYAAA AATVLLAMAL VLVYLQLRTW EEEV
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