Gene Cphy_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1390 
Symbol 
ID5742340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1729845 
End bp1730771 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content36% 
IMG OID641292493 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001558504 
Protein GI160879536 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT TTGTCATTAA TAAAAAAAGG TATATCAAAA ATAAGCATAA AGATAATTTA 
ACAGCGTTTT TATTTTTACT ACCCTGCTTG ATAGGCTTTG TGGCATTCAT CGTATTCCCT
GTAGTAGCAT CATTACTGCT GGGCTTTACG GAGTGGAATT TCCTAGGGGG ATTAAAAGGA
ATTAAATTTA TTGGACTTGA TAATTTTAAA ACACTATTAA GCGGTAAGGA TTTGTGGTTT
AACGAGTCGT TTAAAAACAC GCTTATATTC GCAGCTATAA CAGTACCGGT AGGTTTGGCA
TTGGGACTTA TTGTTGCAAC CGTTATGAAT AAATATGTAT ATTGCTCTGG ATTATTCAAA
GTAATTGTTT TTATACCTTA TATCTCTAGT GTTGTAGCTT CGGTAATTGT ATGGCAGGTT
ATGTTGCAGC CATCCTATGG ACCAATCAAT TCTATATTGA CTTCTTTAGG AATTTCAAAT
CCGCCAAAGT GGTTTGTTGA TCCAAAATGG GCTATGCCAA CCATTATAAT ATTTCAAATA
TGGCAGACAC TTGGCTATAA CGTAATCGTG TTTATGGCAG GCTTAAAAGG AATTTCAAGT
GAGCTTTATG AAGCGGCATC CATTGATGGA GCCTCAGAAT TACGGAAGTT TAAAGATATA
ACAATTCCTT TAATTTCACC TACAACGTTC TTCTTATCTA CCATGGGTAT CATTGGTTCG
TTCAAAGTAT TTGATTCTAT CAGTGTTGCT ACGAAAGGCG GACCGGGAAA TGCAACTTCG
GTCGTTGCGT TTTATATTTA CCGAGAAGCT TTTGAACTAT ATCGAATGGG AACCGCAAAT
GCTGCAGCAT GGATTATGTT TATCATTATC TTTGTTGTTA CCATGATACA ACTTAGGGGA
CAAAACAAAT GGGTTACTTA CGACTAA
 
Protein sequence
MKTFVINKKR YIKNKHKDNL TAFLFLLPCL IGFVAFIVFP VVASLLLGFT EWNFLGGLKG 
IKFIGLDNFK TLLSGKDLWF NESFKNTLIF AAITVPVGLA LGLIVATVMN KYVYCSGLFK
VIVFIPYISS VVASVIVWQV MLQPSYGPIN SILTSLGISN PPKWFVDPKW AMPTIIIFQI
WQTLGYNVIV FMAGLKGISS ELYEAASIDG ASELRKFKDI TIPLISPTTF FLSTMGIIGS
FKVFDSISVA TKGGPGNATS VVAFYIYREA FELYRMGTAN AAAWIMFIII FVVTMIQLRG
QNKWVTYD