Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_27700 |
Symbol | |
ID | 8634404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3087291 |
End bp | 3088256 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | permease component of ABC-type sugar transporter |
Protein accession | YP_003315506 |
Protein GI | 269796051 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.479477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCT CGCTCAGCCC CTCGGCGACG AAGCCGACGG AGCCACCAGC ACCCAGCCCC GCAGCCCCTG TGCGACGGAT GTCGACGAGC CGCAGGCGGG AGGCACGGTA CTTCTACCTG TTCATCTCGC CGTGGATCGT CGGGTTCCTC GCCTTCATGC TCGGCCCGAT GATCGCCTCG GTCTACTACT CCCTCACCGA CTGGGACACG TTCACGCCGC CGACCTTCGT CGGGATCGAC AACTACGTGC GCCTCTTCAC CGACGACCCG ATCTTCTGGA AGGCCCTCGG CAACACGTTC TACTACGCGG CGATCTCCGT GCCGCTCGGA CTCGTGCTCG GGCTGTGGCT GGCGCACCTG CTCAACAAGC AGGTCAGGGC TCGCAAGCTG TTCCGCACCC TCATCTACCT GCCGACGCTC GTCCCGCTCG TCGCGACGGC CATGATCTTC CAGATGGTCC TCGCCCCCGA CGGTCCGCTC AACGGTCTGC TCGGGTGGTT CGGCATCGAC GGACCTGCCT GGCTGCTCGA CCCCGACTGG GTCAAGCCCG CGCTCATCGT GCTCTCCGCG TGGGGAGCCG GCGGGGCGAC CGTCCTGCTG CTCGCCACCA TGAAGGGCAT CCCCAACGAG TTCTACGAGG CGGCCGAGAT CGACGGCGCC GGCTCGGCCC GGCAGTTCTG GTCGATCACC TTCCCGCAGG TCACCCCGAT CATCTTCTTC AACCTCATCA TGGGCCTGAT CGGTGCGTTC CAGATCTTCT CGCAGGTGTA CATCCTCACC TCGGGCGGCC CCAACAACGC GAGCCAGATG GTCGTCCCGC TGCTCTTCAA CGAGGCCTTC TCGTACTACC GGATGGGCTA CGCCTCGGCG ATCTCGTGGG TCCTGTTCGT CATCATCCTG CTGTTCACCC TCGTCGCCTT CCGCACGTCG CGACGCTGGG TCTTCTACGA GACGGAGATG CGCTGA
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Protein sequence | MATSLSPSAT KPTEPPAPSP AAPVRRMSTS RRREARYFYL FISPWIVGFL AFMLGPMIAS VYYSLTDWDT FTPPTFVGID NYVRLFTDDP IFWKALGNTF YYAAISVPLG LVLGLWLAHL LNKQVRARKL FRTLIYLPTL VPLVATAMIF QMVLAPDGPL NGLLGWFGID GPAWLLDPDW VKPALIVLSA WGAGGATVLL LATMKGIPNE FYEAAEIDGA GSARQFWSIT FPQVTPIIFF NLIMGLIGAF QIFSQVYILT SGGPNNASQM VVPLLFNEAF SYYRMGYASA ISWVLFVIIL LFTLVAFRTS RRWVFYETEM R
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