Gene Sked_27700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27700 
Symbol 
ID8634404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3087291 
End bp3088256 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID 
Productpermease component of ABC-type sugar transporter 
Protein accessionYP_003315506 
Protein GI269796051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.479477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCT CGCTCAGCCC CTCGGCGACG AAGCCGACGG AGCCACCAGC ACCCAGCCCC 
GCAGCCCCTG TGCGACGGAT GTCGACGAGC CGCAGGCGGG AGGCACGGTA CTTCTACCTG
TTCATCTCGC CGTGGATCGT CGGGTTCCTC GCCTTCATGC TCGGCCCGAT GATCGCCTCG
GTCTACTACT CCCTCACCGA CTGGGACACG TTCACGCCGC CGACCTTCGT CGGGATCGAC
AACTACGTGC GCCTCTTCAC CGACGACCCG ATCTTCTGGA AGGCCCTCGG CAACACGTTC
TACTACGCGG CGATCTCCGT GCCGCTCGGA CTCGTGCTCG GGCTGTGGCT GGCGCACCTG
CTCAACAAGC AGGTCAGGGC TCGCAAGCTG TTCCGCACCC TCATCTACCT GCCGACGCTC
GTCCCGCTCG TCGCGACGGC CATGATCTTC CAGATGGTCC TCGCCCCCGA CGGTCCGCTC
AACGGTCTGC TCGGGTGGTT CGGCATCGAC GGACCTGCCT GGCTGCTCGA CCCCGACTGG
GTCAAGCCCG CGCTCATCGT GCTCTCCGCG TGGGGAGCCG GCGGGGCGAC CGTCCTGCTG
CTCGCCACCA TGAAGGGCAT CCCCAACGAG TTCTACGAGG CGGCCGAGAT CGACGGCGCC
GGCTCGGCCC GGCAGTTCTG GTCGATCACC TTCCCGCAGG TCACCCCGAT CATCTTCTTC
AACCTCATCA TGGGCCTGAT CGGTGCGTTC CAGATCTTCT CGCAGGTGTA CATCCTCACC
TCGGGCGGCC CCAACAACGC GAGCCAGATG GTCGTCCCGC TGCTCTTCAA CGAGGCCTTC
TCGTACTACC GGATGGGCTA CGCCTCGGCG ATCTCGTGGG TCCTGTTCGT CATCATCCTG
CTGTTCACCC TCGTCGCCTT CCGCACGTCG CGACGCTGGG TCTTCTACGA GACGGAGATG
CGCTGA
 
Protein sequence
MATSLSPSAT KPTEPPAPSP AAPVRRMSTS RRREARYFYL FISPWIVGFL AFMLGPMIAS 
VYYSLTDWDT FTPPTFVGID NYVRLFTDDP IFWKALGNTF YYAAISVPLG LVLGLWLAHL
LNKQVRARKL FRTLIYLPTL VPLVATAMIF QMVLAPDGPL NGLLGWFGID GPAWLLDPDW
VKPALIVLSA WGAGGATVLL LATMKGIPNE FYEAAEIDGA GSARQFWSIT FPQVTPIIFF
NLIMGLIGAF QIFSQVYILT SGGPNNASQM VVPLLFNEAF SYYRMGYASA ISWVLFVIIL
LFTLVAFRTS RRWVFYETEM R