Gene Hlac_2863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2863 
Symbol 
ID7399099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand+ 
Start bp122469 
End bp123539 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content59% 
IMG OID643706683 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002564309 
Protein GI222475788 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTT CTGACGAAAC GGACGATCGG ATTGGGCAGG GGTATCGCCG CCGCGTCCGC 
ATGAAGATAC GGACAGCCAC GAGGCAGTCC AGACGGGCGA TGCGACCGGT CTGGGACCGG 
GTGCGCTTTG CCAGACAGGA CCTGACAGCG GCGACACCGA CGCTGCCGCG GGTCGCGTAT 
CTGTTCATTG CGCCGTTCTT CCTGCTTTTC AGCGTGTTTC TCGCCTTTCC GGTGTTTTAC 
ACGCTGTACC TGTCGTTTTT CGAGTACCAG GGTGTCGGCC AAGGATCGCT GTTCTGGATC 
GATCTCGGCC CGGTGTACAT CGAGATTCCG CAGATCGCAC AGCTGAATTT CGTCGGACTC 
GGAAATTACG CTCGCCTGCT CGGAAACGAC CTCTTCTGGC AGTCGATGTT CAACACCTCG 
TACATCCTCG TCATCCAGGT CCCACTGATG ATCGGGCTGG CGCTCGCGCT CGCACTCGCA 
CTGAACGCGT CGTTCCTGCG GCTCAAAGGG GTGTTCCGCA CCGCCATAGC GCTGCCAGTC 
TCGGCGAACC TTGTGGCGTA CTCGACGGTG TTTCTGCTGC TTTTCAACGA GCAGTTAGGG 
TTCCTCAACT ACGTCCTCGC CGGGGTCGGG ATCGGCCCGG TTCCGTGGCT AACCGACGGA 
TTTTGGGCGC GAAACACGAT CATCGCCGCG GTGACGTGGC GGTGGACGGG GTACAACATG 
ATCATCCTGC TTGCCGGGCT CCAGACGATC CCGCAGCAGC TGTACGAAGC CGCCGAGATC 
GACGGTGCGA ACCGGTGGGA GAAGTTCCGC TACGTCACGC TCCCGCAGCT CAAGCCGGTC 
ATGTTGTTCG TCGTCGTACT ATCGACGATC GGGACGTTCA AACTGTTCGC TGAGCCGTAC 
GTCATCACTG GCGGCGGCCC CACTAACTCG ACAATCACCA TTGTGCAGTA CATCTACCGA 
CAGGCATTCG TCAACTTCAA CCTGGGCTAC GCGAGCGCGC TCACAGTTGT GTTTGTGGCA 
GTTGTCAGCG TGTTTTCTGT TGTCCAGATC AAGATCGGAG GTGAGGACTG A
 
Protein sequence
MATSDETDDR IGQGYRRRVR MKIRTATRQS RRAMRPVWDR VRFARQDLTA ATPTLPRVAY 
LFIAPFFLLF SVFLAFPVFY TLYLSFFEYQ GVGQGSLFWI DLGPVYIEIP QIAQLNFVGL 
GNYARLLGND LFWQSMFNTS YILVIQVPLM IGLALALALA LNASFLRLKG VFRTAIALPV 
SANLVAYSTV FLLLFNEQLG FLNYVLAGVG IGPVPWLTDG FWARNTIIAA VTWRWTGYNM 
IILLAGLQTI PQQLYEAAEI DGANRWEKFR YVTLPQLKPV MLFVVVLSTI GTFKLFAEPY 
VITGGGPTNS TITIVQYIYR QAFVNFNLGY ASALTVVFVA VVSVFSVVQI KIGGED