Gene Noca_4634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4634 
Symbol 
ID4596090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4914888 
End bp4915766 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content70% 
IMG OID639779243 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_925816 
Protein GI119718851 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.219562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGTG GGCGCTGGCG CACCCTCGGG TGGGTCGTCG TGTTCCTCGC TCCCAGCGCG 
GTGCCACTCG TGCTGTTCAC CGCTGTGCCC ATGGTCTCCT CCGCCTGGGT GAGCCTCCAC
GAGTGGAACC TGATCTCGCC GATGCGGTGG GTGGGGCTCG ACAACTACCG GGAGCTGCTG
ACCGACCCCG CGACCCGAGA GGTCTTCTGG CACACGCTGC TGTACGTGGC GGGCTACCTG
CCGCTGGTGT ACGTCGGAGG GCTGGGACTG GCGACGGCCC TCAACCGCCG GATGCCGGCC
AACGCGTTCT TCCGGGCCGC CTACTTCCTG CCGGTCGTCA CCAGCTGGGT CGTGGTCGCG
CTGGTGTGGA AGTGGCTGCT CAACCCCGGC GGCGGTCTCG TCAACGCGCT GCTGGGCGCC
GCCGGCCTCG GCCAGCCCGG GTGGTGGACC GACCCCGCGT GGGCGCTGCC GTCGGTGATC
GTCGCCTCGG CGTGGAAGGA CCTCGGCTTC GTGATGGTGA TCCTGCTCGC GGGTCTGCAG
TCGATCCCCG GTGACGTGCT CGAGGCCGCC GACGTCGACG GTGCCACCGG CTGGAGGCGG
TTCTTGCACG TGACCCTGCC GCTGCTGTCG CCGTCCACGT TCTTCGTGGT CGTGATCTCG
CTGATCAACG GGTTCCAGGT CTTCGACCAG GTCTTCGTGA TGACCGGCGG CGGGCCCGCG
GGGTCCAGCC AGGTCGTGGT CGGCCAGATC TACGACCTCA CCTTCCGCTA CGGCCGTGCC
GGCGAGGCCT CCGCCCTCTC GTGGCTCCTG TTCGTCGTGA TCCTCGCGAT CACCGCGGTC
CAGATCCGGG GCCAGCGCCG GTGGGTGCAC CATGTCTGA
 
Protein sequence
MHGGRWRTLG WVVVFLAPSA VPLVLFTAVP MVSSAWVSLH EWNLISPMRW VGLDNYRELL 
TDPATREVFW HTLLYVAGYL PLVYVGGLGL ATALNRRMPA NAFFRAAYFL PVVTSWVVVA
LVWKWLLNPG GGLVNALLGA AGLGQPGWWT DPAWALPSVI VASAWKDLGF VMVILLAGLQ
SIPGDVLEAA DVDGATGWRR FLHVTLPLLS PSTFFVVVIS LINGFQVFDQ VFVMTGGGPA
GSSQVVVGQI YDLTFRYGRA GEASALSWLL FVVILAITAV QIRGQRRWVH HV