More than 300 homologs were found in PanDaTox collection
for query gene Xfasm12_1606 on replicon NC_010513
Organism: Xylella fastidiosa M12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010513  Xfasm12_1606  ABC transporter sugar permease  100 
 
 
293 aa  585  1e-166  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  97.95 
 
 
293 aa  574  1.0000000000000001e-163  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  81.91 
 
 
294 aa  475  1e-133  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  79.18 
 
 
293 aa  455  1e-127  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  54.3 
 
 
294 aa  321  9.999999999999999e-87  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  57.14 
 
 
287 aa  308  9e-83  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  43.21 
 
 
291 aa  259  5.0000000000000005e-68  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  41.13 
 
 
314 aa  230  2e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  42.41 
 
 
319 aa  224  2e-57  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
NC_013235  Namu_0513  binding-protein-dependent transport systems inner membrane component  42.76 
 
 
314 aa  221  8e-57  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  40.89 
 
 
353 aa  218  1e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  40 
 
 
300 aa  204  1e-51  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  41.79 
 
 
317 aa  204  2e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
310 aa  198  7.999999999999999e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
305 aa  197  2.0000000000000003e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012028  Hlac_2863  binding-protein-dependent transport systems inner membrane component  41.01 
 
 
356 aa  197  2.0000000000000003e-49  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
309 aa  196  3e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  41.37 
 
 
288 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
299 aa  196  5.000000000000001e-49  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  40.82 
 
 
306 aa  196  5.000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  40.83 
 
 
306 aa  194  1e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
316 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  39.86 
 
 
313 aa  194  2e-48  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  39.21 
 
 
306 aa  192  5e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  38.2 
 
 
317 aa  192  6e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
325 aa  192  7e-48  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  40.65 
 
 
299 aa  192  8e-48  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
321 aa  191  1e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  38.14 
 
 
318 aa  191  1e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  40 
 
 
307 aa  191  2e-47  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  40 
 
 
307 aa  191  2e-47  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
316 aa  189  2.9999999999999997e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
309 aa  189  2.9999999999999997e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  39.43 
 
 
320 aa  188  8e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  36.81 
 
 
294 aa  188  8e-47  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  35.54 
 
 
317 aa  188  9e-47  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
318 aa  187  1e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  38.41 
 
 
320 aa  187  2e-46  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  38.75 
 
 
292 aa  186  3e-46  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
320 aa  186  4e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  37.5 
 
 
293 aa  186  5e-46  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  41.91 
 
 
420 aa  186  5e-46  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  41.91 
 
 
420 aa  186  6e-46  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
309 aa  185  7e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6113  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
286 aa  185  8e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.453278  normal 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  41.47 
 
 
314 aa  184  1.0000000000000001e-45  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  38.85 
 
 
296 aa  184  1.0000000000000001e-45  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
293 aa  184  1.0000000000000001e-45  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  39.35 
 
 
315 aa  184  2.0000000000000003e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  38.79 
 
 
279 aa  184  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  36.68 
 
 
294 aa  183  2.0000000000000003e-45  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
298 aa  184  2.0000000000000003e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  39.54 
 
 
294 aa  183  3e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  38.49 
 
 
296 aa  183  3e-45  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
306 aa  183  3e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
305 aa  183  3e-45  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_011371  Rleg2_6525  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
286 aa  182  4.0000000000000006e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.728774  normal  0.302995 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
296 aa  182  4.0000000000000006e-45  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  37.77 
 
 
296 aa  182  7e-45  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
296 aa  182  7e-45  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  38.85 
 
 
296 aa  181  1e-44  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  38.85 
 
 
296 aa  181  1e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  34.25 
 
 
289 aa  180  2.9999999999999997e-44  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  36.5 
 
 
308 aa  180  2.9999999999999997e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_009616  Tmel_1616  binding-protein-dependent transport systems inner membrane component  39.83 
 
 
429 aa  179  4e-44  Thermosipho melanesiensis BI429  Bacteria  normal  0.225919  n/a   
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  40.93 
 
 
319 aa  179  4e-44  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
311 aa  179  4e-44  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  37.41 
 
 
296 aa  179  4.999999999999999e-44  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
295 aa  179  7e-44  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  37.96 
 
 
317 aa  177  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
296 aa  178  1e-43  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  40.77 
 
 
290 aa  177  2e-43  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  39.36 
 
 
297 aa  177  2e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
310 aa  177  2e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
300 aa  176  3e-43  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
311 aa  177  3e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
300 aa  176  3e-43  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  38.49 
 
 
301 aa  176  4e-43  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_011830  Dhaf_2160  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
292 aa  176  4e-43  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.07173  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  36.9 
 
 
298 aa  176  4e-43  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
309 aa  176  5e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  39.72 
 
 
322 aa  176  5e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
292 aa  176  6e-43  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
325 aa  175  9e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
308 aa  174  9.999999999999999e-43  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_013205  Aaci_0077  binding-protein-dependent transport systems inner membrane component  38.6 
 
 
311 aa  175  9.999999999999999e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  37.19 
 
 
311 aa  174  9.999999999999999e-43  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
317 aa  175  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  38.54 
 
 
316 aa  174  9.999999999999999e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  38.91 
 
 
311 aa  175  9.999999999999999e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  36.16 
 
 
305 aa  175  9.999999999999999e-43  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
314 aa  175  9.999999999999999e-43  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
308 aa  175  9.999999999999999e-43  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0918  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
298 aa  174  1.9999999999999998e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  36.92 
 
 
319 aa  173  3.9999999999999995e-42  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  39.92 
 
 
294 aa  172  5e-42  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  36.31 
 
 
417 aa  172  5e-42  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
305 aa  172  5e-42  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
321 aa  172  5.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  37.46 
 
 
290 aa  172  5.999999999999999e-42  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
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