| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1801 |
|---|
| Symbol | |
|---|
| ID | 6089437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2001414 |
|---|
| End bp | 2002304 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641596869 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001720545 |
|---|
| Protein GI | 170024040 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.780468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAA ACAGAATGCT GGGGTTAGCC TATATATCAC CTTATATAAT AGGGTTGATA
ATATTCACGG CTTTCCCCTT TGTATCATCT TTCTTTCTCA GTTTTACTGA GTATGACTTA
ATGAGCCCTC CCGTCTATAA CGGGATCGAG AATTATCGTT ATATGCTGAC GGAAGATGAC
TTATTCTGGA AATCCATGGG CGTGACTTTC GCTTATGTGT TTCTGACTAT TCCATTAAAA
TTGGCTTTTG CTCTAGGGAT CGCTTTTGTA CTGAACTTTA AATTACGGGG TATCGGTTTC
TTCCGTACCG CATTCTATAT CCCATCAATC CTCGGCAGCA GCGTAGCGAT TGCCGTATTA
TGGCGCGCGT TATTCGCGAT TGATGGTTTG CTTAATAGCT TTATTGGTGT CTTTGGGTTT
GAGGCTATCA ACTGGCTGGG AGAGCCATCA CTCGCGTTGA CCTCCGTCAC ATTACTGCGT
GTGTGGCAGT TCGGTTCTGC CATGGTTATC TTCTTGGCCG CGTTGCAGAA CGTACCACAG
TCACAATATG AAGCAGCCAT GATTGATGGT GCCTCTAAAT GGCAAATGTT TATGAAAGTC
ACCGTGCCAC TGATTACGCC GGTTATTTTC TTTAACTTTA TTATGCAAAC TACGCAGGCC
TTCCAAGAAT TTACTGCACC TTATGTCATT ACCGGTGGTG GGCCAACCCA TTACACCTAT
TTATTCTCAC TCTATATCTA CGATACAGCG TTTAAATATT TTGATATGGG ATACGGCGCT
GCATTAGCCT GGGTGTTATT CCTGGTCGTC GCCCTCTTTG CCTCAATTGC ATTTAAATCA
TCTAAATATT GGGTCTTCTA CTCCGCCGAT AAAGGAGGAA AAAATGACTG A
|
|---|
| Protein sequence | MNENRMLGLA YISPYIIGLI IFTAFPFVSS FFLSFTEYDL MSPPVYNGIE NYRYMLTEDD
LFWKSMGVTF AYVFLTIPLK LAFALGIAFV LNFKLRGIGF FRTAFYIPSI LGSSVAIAVL
WRALFAIDGL LNSFIGVFGF EAINWLGEPS LALTSVTLLR VWQFGSAMVI FLAALQNVPQ
SQYEAAMIDG ASKWQMFMKV TVPLITPVIF FNFIMQTTQA FQEFTAPYVI TGGGPTHYTY
LFSLYIYDTA FKYFDMGYGA ALAWVLFLVV ALFASIAFKS SKYWVFYSAD KGGKND
|
|---|
| |