Gene RoseRS_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1357 
Symbol 
ID5208309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1665649 
End bp1666599 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content59% 
IMG OID640594968 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001275707 
Protein GI148655502 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACGC CTCATACCCA ACCACGCCTC TCAGTGCAGC GTCCGGCGCG CCGGGCGAGC 
CGTCGCCAGC GCATCGAAGC CATCAACGCC TACATCTTCA TGGCGCCAGC CATCCTTGGA
TTGCTCCTCT TCACGCTTGG TCCCATGGCG GCTTCATTCC TGCTCAGTTT CACCGAGTAC
AACATCTTGA CCGACCCGCG CTGGAATGGG CTGGCAAACT ACGAAAAACT CTTCAACGAC
AAACTCTTCT GGCAGTCGCT CAGGGTCAGC GCCATTTACT CCATCGTCAG CGTCCCCCTG
GGGCTGACAA TCGCTCTTGG TCTGGCGCTA CTCCTGAACC ACAAAATGCG CGGGATCATG
GTCTTCCGCT CGGTGTACTA TCTGCCGACC GTCATTTCCG GCGTCGGAGT GGCGATGCTC
TGGCGCTGGT TGTTCAACGG CGATTTCGGC ATCATCAACG TCTTGCTCCG AGGGGTTGGA
ATCCGCGGTC CCAACTGGCT CTTCGACGAA ACCTGGGCGC TGGTGGCGCT GATCATCGCC
AGTTTGTGGG GCATCGGCGG CACAATGCTG ATCTTTCTGG CGGGATTGCA GGGGATTCCG
CAGGAATTGT ACGAAGCTGC CGAGATCGAT GGCGCCGGCC GATGGCGACA GTTCTCCAGC
ATCACCCTGC CGATGATCTC GCACGTTACC TTCTTCAATC TGGTGTTGGG CGTCATCGGT
GCGTTGCAGG TCTTCACCGA CGCTTATGTT ATCACCGGTG GCGGACCGAA CAACGCCACC
CTGTTCCTGT CGGTCTATCT CTACCGCCAC GCCTTTCAGT ATCTGAATTT CGGGTATGCT
GCGGCAGTCG CGTGGGTGCT GTTCCTGATC GTGCTGGCAT TGACATTACT GGTCTTCAAA
TCGTCGCCGC TCTGGGTCTA CTACGAGAGT GAGCGACCGG GGAGGGGTTG A
 
Protein sequence
MDTPHTQPRL SVQRPARRAS RRQRIEAINA YIFMAPAILG LLLFTLGPMA ASFLLSFTEY 
NILTDPRWNG LANYEKLFND KLFWQSLRVS AIYSIVSVPL GLTIALGLAL LLNHKMRGIM
VFRSVYYLPT VISGVGVAML WRWLFNGDFG IINVLLRGVG IRGPNWLFDE TWALVALIIA
SLWGIGGTML IFLAGLQGIP QELYEAAEID GAGRWRQFSS ITLPMISHVT FFNLVLGVIG
ALQVFTDAYV ITGGGPNNAT LFLSVYLYRH AFQYLNFGYA AAVAWVLFLI VLALTLLVFK
SSPLWVYYES ERPGRG