Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1357 |
Symbol | |
ID | 5208309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1665649 |
End bp | 1666599 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594968 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001275707 |
Protein GI | 148655502 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATACGC CTCATACCCA ACCACGCCTC TCAGTGCAGC GTCCGGCGCG CCGGGCGAGC CGTCGCCAGC GCATCGAAGC CATCAACGCC TACATCTTCA TGGCGCCAGC CATCCTTGGA TTGCTCCTCT TCACGCTTGG TCCCATGGCG GCTTCATTCC TGCTCAGTTT CACCGAGTAC AACATCTTGA CCGACCCGCG CTGGAATGGG CTGGCAAACT ACGAAAAACT CTTCAACGAC AAACTCTTCT GGCAGTCGCT CAGGGTCAGC GCCATTTACT CCATCGTCAG CGTCCCCCTG GGGCTGACAA TCGCTCTTGG TCTGGCGCTA CTCCTGAACC ACAAAATGCG CGGGATCATG GTCTTCCGCT CGGTGTACTA TCTGCCGACC GTCATTTCCG GCGTCGGAGT GGCGATGCTC TGGCGCTGGT TGTTCAACGG CGATTTCGGC ATCATCAACG TCTTGCTCCG AGGGGTTGGA ATCCGCGGTC CCAACTGGCT CTTCGACGAA ACCTGGGCGC TGGTGGCGCT GATCATCGCC AGTTTGTGGG GCATCGGCGG CACAATGCTG ATCTTTCTGG CGGGATTGCA GGGGATTCCG CAGGAATTGT ACGAAGCTGC CGAGATCGAT GGCGCCGGCC GATGGCGACA GTTCTCCAGC ATCACCCTGC CGATGATCTC GCACGTTACC TTCTTCAATC TGGTGTTGGG CGTCATCGGT GCGTTGCAGG TCTTCACCGA CGCTTATGTT ATCACCGGTG GCGGACCGAA CAACGCCACC CTGTTCCTGT CGGTCTATCT CTACCGCCAC GCCTTTCAGT ATCTGAATTT CGGGTATGCT GCGGCAGTCG CGTGGGTGCT GTTCCTGATC GTGCTGGCAT TGACATTACT GGTCTTCAAA TCGTCGCCGC TCTGGGTCTA CTACGAGAGT GAGCGACCGG GGAGGGGTTG A
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Protein sequence | MDTPHTQPRL SVQRPARRAS RRQRIEAINA YIFMAPAILG LLLFTLGPMA ASFLLSFTEY NILTDPRWNG LANYEKLFND KLFWQSLRVS AIYSIVSVPL GLTIALGLAL LLNHKMRGIM VFRSVYYLPT VISGVGVAML WRWLFNGDFG IINVLLRGVG IRGPNWLFDE TWALVALIIA SLWGIGGTML IFLAGLQGIP QELYEAAEID GAGRWRQFSS ITLPMISHVT FFNLVLGVIG ALQVFTDAYV ITGGGPNNAT LFLSVYLYRH AFQYLNFGYA AAVAWVLFLI VLALTLLVFK SSPLWVYYES ERPGRG
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