Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0131 |
Symbol | |
ID | 6407774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 144550 |
End bp | 145509 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710040 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001989169 |
Protein GI | 192288564 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.128042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAGG TGGCGATGTC TGACGCTGCC GTCTCGCTGC GCGATCTCGA TGCGCTCACA ACCGCGCGCG CGTCGGCCAA GCCGCGTCGC CGTGGCCGCG GCACCGTCGC CTACGGTCTG GTCGCGCCGG CGTTCACGCT GATGCTGCTG ATGCTGCTCG GCCCACTCGC CGGCGTGATC GCGCTGTCGT TCACCGATTA TCAGCTCGGC GCGCCGTCGT TCGCCTGGAT TGGCCTTGCC AATTATCAGC AGCTGTTCGC CGACCGGGTG TTCTGGATCT CGCTGATCAA TACGTTGACC TATGCGGTGA TCGTGGTGCC GGGCTCGGTC GCGCTCGGCC TCGGCGTGGC GATGCTGATC GAGAGTGGCA CGCATCTTCG TGCCTTCTAT CGCACCATCT ACTTTCTGCC GGTGATGGCG ACCCTGATCG CGATGGCGAT CGTCTGGGAG TTCATGCTGC ACCCGCAGTT CGGCCTGGTG AACGGGCTGA TCAAGATGGT CGGCCTCGCG CCGCATCCCT GGCTGCAGGA TCGTGGCACC GCGCTGTATG CACTGTGCGC GATCGGGATC TGGCAGGCGG TCGGTTTCAA CATGGTGCTG TTCCTCGCCG GGCTGATGTC GATCCCCAAG CATCTCTATG ACGCCGCCGA GATCGATGGC GCCGCGAGTG CGTGGTCGCG GTTCCGGCTG GTGACCTGGC CGATGCTCGG ACCGGTGACG CTGTTCGTGG TGGTGATCAC CGGCATCCGG TCGTTCCAGG TGTTCGACAC TGTGCACGTC CTCACCAAGG GCGGCCCGTC GAAATCCACC GAGGTGCTGA TCCACACCAT GTACATGGAG GGCTTCGAGT TCTTCCGCTC CGGCTATGCC GCCGCGGTGA CCGTGGTGTT CCTCGGCCTG GTGCTGCTGC TGACCCTGGT GAAATCGCGG CTCGCCGCCA AGCAGGTGCA CTACGCATGA
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Protein sequence | MSEVAMSDAA VSLRDLDALT TARASAKPRR RGRGTVAYGL VAPAFTLMLL MLLGPLAGVI ALSFTDYQLG APSFAWIGLA NYQQLFADRV FWISLINTLT YAVIVVPGSV ALGLGVAMLI ESGTHLRAFY RTIYFLPVMA TLIAMAIVWE FMLHPQFGLV NGLIKMVGLA PHPWLQDRGT ALYALCAIGI WQAVGFNMVL FLAGLMSIPK HLYDAAEIDG AASAWSRFRL VTWPMLGPVT LFVVVITGIR SFQVFDTVHV LTKGGPSKST EVLIHTMYME GFEFFRSGYA AAVTVVFLGL VLLLTLVKSR LAAKQVHYA
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