Gene TRQ2_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0115 
Symbol 
ID6091517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp109662 
End bp110564 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content45% 
IMG OID642487297 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001738160 
Protein GI170287922 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGGAA GGTACTACAA GAGTCTGAGA AAAAAACAGC TTCTTCTTGC ATTCTTCTTC 
ATAACGATCC CAACTCTCCT CATGGTGCTT TTCATATATT ATCCTCTCGT GTTCGGTATC
AAAATATCCT TTTACCAGTA CGACATAGTG GGAGAATCTC TTTATATTGG ACTGAAAAAC
TACGTCGATC TGCTTCGCGA TCCTTTATTC TGGAACGCCT TCAAAAACAG TCTTTTGTAC
CTGCTTGTTG TACCTCCGCT CCAGCTCATT TCTATACTGC TTGCAGTCCT GCTCGACAGG
GCCATAAGGG GTAGGAATCT TTTCAGAACT CTCATCTTTC TTCCAGTGGT TACTCCCATC
ACCATCGCTG CGATCACATG GCAGTGGATG TACAGAGAAA AAGGATTCAT CAACTTTCTT
CTCCAATCAC TTCATATTAT AGACGAGCCG ATTGCTTTCC TCTCGGATCC CAAGATAGCT
CTCTTCGCTA TCATGTTTGT CACCATGTGG AAGGGCTTCG GTTACTACAT GGTCATATAT
CTGGCAGGAC TACAGAGCAT CCCCAGGGAA TTGATAGAGG CTGCCAGGGT TGACGGTGCG
AAGCCTTCTC AGGTCTTCTT CAAAGTGACG ATCCCCCTTC TGAAACCGTA CATCCTGTTT
TGCTCAACCA TGTCATCTAT AGCGGCTTTG AACGTCTTCG GAGAGATTTA CGCCATGACA
AAAGGTGGCC CGGTTCACGC AACGGAAACA ATGGGAATTT TCATATACAA TCGAGCTTTT
GAATATCTCC AATTCGGATA TTCGAACGCC GCCGCTGTTC TGTTCAGCTT CGTTGTGATT
GCGTTTTCGC TTCTGAACTT CTACCTGTTC AGGGAAGGAG GTTTGAAGAG CTATTATGCC
TAA
 
Protein sequence
MPGRYYKSLR KKQLLLAFFF ITIPTLLMVL FIYYPLVFGI KISFYQYDIV GESLYIGLKN 
YVDLLRDPLF WNAFKNSLLY LLVVPPLQLI SILLAVLLDR AIRGRNLFRT LIFLPVVTPI
TIAAITWQWM YREKGFINFL LQSLHIIDEP IAFLSDPKIA LFAIMFVTMW KGFGYYMVIY
LAGLQSIPRE LIEAARVDGA KPSQVFFKVT IPLLKPYILF CSTMSSIAAL NVFGEIYAMT
KGGPVHATET MGIFIYNRAF EYLQFGYSNA AAVLFSFVVI AFSLLNFYLF REGGLKSYYA