Gene Rleg_6113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6113 
Symbol 
ID8016070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp152942 
End bp153802 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content58% 
IMG OID644827419 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978619 
Protein GI241258735 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.453278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCA GAACCCGGAG CGCCTATGCG TTCCTCGCCC CCTATCTGCT GGTCTTTGCC 
ACCTTCTGGG TCTGGCCGAT CATCAATTCG TTCCTGATTT CGTTTCAGAA CACGCGAATC
AATCCGTGGA AATTCAGTTT CCAGGCCAAT TGGGGCCGGC TCTTCTATGA CCCGGCTTTC
TACAACGCTC TCTACAATAC GCTGATCATC CTGGTGATCC AGGTGCCTGT GATGATTGCG
CTTGCGACGG TCATGGCCGT AATGCTCAAT TCGCCGCTGC TAAAAGCGCG GCCGCTCTTC
CGCTTCGCCT TCTTTGCGCC TGTCGTCGTC GGCGAGGTCG CCTATGCTGC CGTCTTCCGG
CTCATGTTCA GCCTCGATTT CGGCATCATC AACAAGCTGA TCTCGGCCGT CGGTCTCAGC
CCGGTCTCCT GGTTCGACAA CGCCAATGCC GCCATGGCGC TGATCATCCT TGCCGTCACA
TGGCGCTGGG CGGGCTACAA CGCGATCATC ATCCTCGCCG GTCTGCAGTC GATTCCCGAC
GATGTCTACG AGGCAGCGAC ACTCGACCGG GTGAGCAAGA TCCAACAATT CTTTCATATC
ACCCTGCCGC TTCTGAAACC GATCATCCTC TTTTGCGTGG TTCTTTCGGT GATCGGCACC
ATGCAGCTGT TCACCGAGCC CTTCCTGATC ACCAATCGTG GCGGTCCCGG CGGCGGTACC
GAGACGCTCG GCCTGCTGCT TTATCGCCAG GGCTTCACCT CGCTGAACTT CGGCTATGCC
TCGGCGATCG CCTATACGAT GGCTGCCCTT GCCGTGGCGA TCTCGCTTCT CAATCTCTGG
GTCGGGAGGG ATCCGAAATG A
 
Protein sequence
MPFRTRSAYA FLAPYLLVFA TFWVWPIINS FLISFQNTRI NPWKFSFQAN WGRLFYDPAF 
YNALYNTLII LVIQVPVMIA LATVMAVMLN SPLLKARPLF RFAFFAPVVV GEVAYAAVFR
LMFSLDFGII NKLISAVGLS PVSWFDNANA AMALIILAVT WRWAGYNAII ILAGLQSIPD
DVYEAATLDR VSKIQQFFHI TLPLLKPIIL FCVVLSVIGT MQLFTEPFLI TNRGGPGGGT
ETLGLLLYRQ GFTSLNFGYA SAIAYTMAAL AVAISLLNLW VGRDPK