| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1942 |
|---|
| Symbol | |
|---|
| ID | 3103589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2090479 |
|---|
| End bp | 2091342 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637171097 |
|---|
| Product | sugar ABC transporter, permease protein |
|---|
| Protein accession | YP_114375 |
|---|
| Protein GI | 53804002 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCGAA ATCCCGCCTT CTGGTTCGTC GCGCCGGCAC TGGCGCTGCT CGCCGTGTTC
TTCTTCCTGC CGGTTGCGGC GGCATTGGGC CTCAGCTTCA CCGATTTCGA CATCTACGCG
CTGGCCGACA TCCGCCGGCT CCGGTTCGTG GGTCTGGACA ACTACCGCCG CTTGTTCGGC
GATCCGGAAT TCTGGCAGGC CCTGCGGAAT ACCCTGTATT TCGTGGCCGT GGGCGGTCCG
TTATCGGTGT TGGTTTCGCT GGCGGCGGCC CTTCTGGTCA ACCACCGCCT GGCCCCCTTC
AAGGGGCTAT TCCGCTCCTT GTTGTTCCTG CCGGTGGTGA CGACCCTGGT GGCCGTGGCG
GTGGTCTGGC GCTACATGTA CCAACCGCGC TACGGCATTC TCAACCATCT GCTCGGCAGG
TTCGGCCTCG AACCGGTCGA CTGGCTGGGT GATCCGGACT GGGCGATGCC GGCGATCATC
GTCATGGCGG TGTGGAAGAA TTTCGGTTTC AACATGATCG TGTTCGTGGC CGGTCTCCAG
AGCATCCCCG AATCGCTGTA CGAGGCGGCC AGCATCGACG GGGCGGGCCA TCGCCGGCAA
TTCTTCCACA TCACCCTGCC ACTGCTCGCA CCGACCTTTC TGTTTGTCGC CGTGATCACC
GTGATCGGGC ATTTCCAGTT GTTCGCCGAA CCTTACGTCA TGACTCAGGG CGGCCCTGCC
GGCAGCACGC TCAGTCTTGC CCTCCTGATG TACCAGCAGG GATTCCGCTG GTGGAATCTG
GGGTACGCCG CTGCGATCGC CTTCGTGCTG TTCGGCATCG TCGGCTCTTT CGCCGTCTTG
CTCGCGCTGG CCAGGCGGAA GTGA
|
|---|
| Protein sequence | MRRNPAFWFV APALALLAVF FFLPVAAALG LSFTDFDIYA LADIRRLRFV GLDNYRRLFG
DPEFWQALRN TLYFVAVGGP LSVLVSLAAA LLVNHRLAPF KGLFRSLLFL PVVTTLVAVA
VVWRYMYQPR YGILNHLLGR FGLEPVDWLG DPDWAMPAII VMAVWKNFGF NMIVFVAGLQ
SIPESLYEAA SIDGAGHRRQ FFHITLPLLA PTFLFVAVIT VIGHFQLFAE PYVMTQGGPA
GSTLSLALLM YQQGFRWWNL GYAAAIAFVL FGIVGSFAVL LALARRK
|
|---|
| |