| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3573 |
|---|
| Symbol | |
|---|
| ID | 7860837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3969963 |
|---|
| End bp | 3971024 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643867676 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002883577 |
|---|
| Protein GI | 229822051 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.500594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCTCCC GGACCGAGGC CGGCCCCGGC GCGGCTGCGC CGGGGCCCGG CCCCTCGCCC
GAGACCTCCC CGCGCATCGG CCCGGGGCGG GACATCGCCG TCCGCGCGCA CTCCCCGCTG
TACCGGCGGC GCACCCGGAT CGCGTGGGGG TTCGCGATCC CGTTCATGGT GCTCTTCCTC
GCGTTCACGC TCGGGCCGGT GCTCATGTCG CTCGGGATGT CCGTCACGGA CATCCGCAGC
GCCGACCTGC GCAACCCGTT CGACGTCAAC TTCGTCGGGC TCGACAACTT CGCCGCGGTG
TTCGCCGACG AGATCTTCCG CAAGGCGGCG CTGAACACCG CGTACTTCGT GCTCGTCGGG
ATCCCCCTGA CGATCGCACT GTCGCTCGCG ATCGCCGTCC TCCTCAACAT CGGGATCACG
CGCCTCAAGG CGTTCTTCCG CATCGGCTAC TACATGCCGG TCGTGACGAG CATCGTGGCC
GTCGCCGTCG TCTGGCGGTT CCTGCTGCAG CCGGACAACG GCCTCATCAA CGAGGTCCTC
GGCTGGTTCG GTATCGACGG TCCGAACTGG CTCGCTAGCA CCACCTGGGC GATGCCCGCC
CTCATCGCCA TGGCGACCTG GCGGTCGATC GGGACGCTCA TCATCATCTT CCTGGCCGGG
CTACAGGCGG TCGACCCGGC GCAGCACGAG GCGGCAGCGC TCGACGGCGC CGGCGGCTGG
CAGCGATTCC GGTTCGTGAC GCTTCCCGCG GTCCGCCCGA CGCTGCTGTT CGCCGCCGTC
ATCACCGGCA TCGGCTACCT GCAGTTCTTC GAGGAGCCCT TCGTCATGAC GCAGGGTGGC
CCGCTCAACA GCACGATCTC CGTGGCCTAC TACATCTACA ACCAGTTCGG GTTCGGCAAC
TACGGCTTCG CGGCCGCGAT GAGCTACGTC CTGTTCGTCG CGATCATCAT CCTCACGCTG
GTGCAGTTCC GGGCGCTCGG GGACCGTGAC GAGACGAAGA GGCGCCGACG CCGCAAGCCG
GCGCGCGCCG TCGTGCCCGC CACCCCAGGA GGTACGCGAT GA
|
|---|
| Protein sequence | MSSRTEAGPG AAAPGPGPSP ETSPRIGPGR DIAVRAHSPL YRRRTRIAWG FAIPFMVLFL
AFTLGPVLMS LGMSVTDIRS ADLRNPFDVN FVGLDNFAAV FADEIFRKAA LNTAYFVLVG
IPLTIALSLA IAVLLNIGIT RLKAFFRIGY YMPVVTSIVA VAVVWRFLLQ PDNGLINEVL
GWFGIDGPNW LASTTWAMPA LIAMATWRSI GTLIIIFLAG LQAVDPAQHE AAALDGAGGW
QRFRFVTLPA VRPTLLFAAV ITGIGYLQFF EEPFVMTQGG PLNSTISVAY YIYNQFGFGN
YGFAAAMSYV LFVAIIILTL VQFRALGDRD ETKRRRRRKP ARAVVPATPG GTR
|
|---|
| |