Gene Ava_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0461 
Symbol 
ID3682466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp586038 
End bp586943 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content40% 
IMG OID637715790 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_320982 
Protein GI75906686 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0667876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTGC GAATCAGAAG GTGGAGAAAT AACCATAGAC GGAACATCAC AGACAGCTTG 
TTCGGATATG TGTTCATGAT GCCGACTCTG TTGGTTTTGG GAACTTTTGT AGTTCTACCT
ATTCTCTACT CTGTTTTTCT TTCGCTCAAC AAAGTTCAAC TGTTAGGTGG TGTTGCCTAT
CAATTCATTG GTTTACGAAA TTTTCAGCGA TTAGTTGATG ATCAATTAGT TTGGATTGCT
TTAAGAAATA CAGCAGAATA TGTGGTTATT GTTGTACCAA GCCAAACTAT TTTGGCGTTG
ATTTTAGCGG TCACCTTAAA TGCTGGAATC CGGGGTAAAA ACTGGTGGCG CATCCTTTAC
TTTTTGCCAA CAGTCACTTC TTCCGCAGTG CTGACGCTAA TTTTTATGTG GATTTATAAT
ACCGATGGAC TATTAAATGA TTTTTTAGCT TTTGTGGGAC TGCCTACTTA TAATTGGTTG
GGTGATCCGG CGGTTGCCCT CAAAGGCATC ATGCTAATGA ATATTTGGTC AACCGCACCA
TTTTATATGG TGATATATCT AGCAGCCTTA CAAGATATAC CAGCAAAACT TTACGAGGCG
GCAGAATTAG ATGGTGCAAA TTGGTGGCAG AAGTTTATTT ACATCACAAT TCCTCTGCTG
AAACCTGTGA CTTTTTTTGT GATTGCAGTG GGGGTAATTG GCACTTTTCA ATTATTTGAT
CAATCTTATA TTTTCTCTGG TGGTACTGGT GGCCCTAATA ATGCCACCTT GACTGTAGTA
CTGCTGATTT ATCAAATGGT ATTTCGTTAT TTACAGATGG GATATGCTGC GGCGATCGCC
TTTCTCTTAG CAGTGGTGAT TATTGCTATT ACACTGATTC AACGGCGAGT TTTTGCTGGT
GAATAA
 
Protein sequence
MVLRIRRWRN NHRRNITDSL FGYVFMMPTL LVLGTFVVLP ILYSVFLSLN KVQLLGGVAY 
QFIGLRNFQR LVDDQLVWIA LRNTAEYVVI VVPSQTILAL ILAVTLNAGI RGKNWWRILY
FLPTVTSSAV LTLIFMWIYN TDGLLNDFLA FVGLPTYNWL GDPAVALKGI MLMNIWSTAP
FYMVIYLAAL QDIPAKLYEA AELDGANWWQ KFIYITIPLL KPVTFFVIAV GVIGTFQLFD
QSYIFSGGTG GPNNATLTVV LLIYQMVFRY LQMGYAAAIA FLLAVVIIAI TLIQRRVFAG
E