| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4872 |
|---|
| Symbol | |
|---|
| ID | 8007259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 253266 |
|---|
| End bp | 254198 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644821801 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002973061 |
|---|
| Protein GI | 241113226 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.181942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.51159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTGC AACAGACCTC CACGCCCGCT TTGCGACGTC CGGCCAAACG CCGCGACAAC
AAGCGGCTCT GGCAGGAAAT GGCGATGATC GCGCCTGCCT TTCTGCTTAT GGCGATATTC
CTGATCACGC CGTTCCTCTT GTCCTTCTGG ACGGCGATGA CCAACCAGCC GCTCGTGCCG
CGCCCGACGC CGGTGCGCTT CGTCGGCCTC CTGAATTTCG AGCGCGTCTT CACCGATCCG
CTGTTCTGGA CCTCGCTGTG GAACGTCACG CGCTTCACCG TCTGGGTGCT GCCGCTGCAG
TGCGGCCTCG CCTTCCTGAC CGCGCTCCTC TTGCATCAGA AGCTGCCGAT GCAAAACCTG
CTGCGCGGCC TGTTCTTCCT GCCGGCGATC ACCTCCATGG TGGTGGTCTG CGTCATCTGG
GGCACGCTTT TCCAGTACCC GAGCGGCCCG CTCAACCAGA TCGTCGGTTT CCTTTCCGGC
GGCACGATTC AGCCAATCGA CTGGCTCGGC GACCCCAACT GGGCGATGTT CTCCATCGTG
TTGCTTTCAG CCTGGCAGGC CTATGGCTTT CAGATGATCA TCTATCTCGC CGGCCTGCAG
GGCATTCCCG AAGAACTATA CGATGCCGCC CGCATCGACG GGGCAAGCGC GCTGCGCCGC
TTCTGGCACG TCACCATGCC CGGTCTTCGC CCGACCCATG TCTTCGTGCT GGTCATCACC
ACGATCCAGG CCTTCAAGCT CTATACGCAG GTGGCAATCC TCACCCAGGG CGGCCCGAAC
GAAAGCACCG AAACCGTTGT CCACTACATG GTGCGCGCCG GCTTCGAGGA GCAGAAACTC
GGCTACGCAT CGGCCGTGTC CGTCATCCTC TTCGTCATCG TTCTTCTGAT CGCGCTCCTG
CAACGCAAAC TCCTGAGGCG CTTCGATGTC TGA
|
|---|
| Protein sequence | MTLQQTSTPA LRRPAKRRDN KRLWQEMAMI APAFLLMAIF LITPFLLSFW TAMTNQPLVP
RPTPVRFVGL LNFERVFTDP LFWTSLWNVT RFTVWVLPLQ CGLAFLTALL LHQKLPMQNL
LRGLFFLPAI TSMVVVCVIW GTLFQYPSGP LNQIVGFLSG GTIQPIDWLG DPNWAMFSIV
LLSAWQAYGF QMIIYLAGLQ GIPEELYDAA RIDGASALRR FWHVTMPGLR PTHVFVLVIT
TIQAFKLYTQ VAILTQGGPN ESTETVVHYM VRAGFEEQKL GYASAVSVIL FVIVLLIALL
QRKLLRRFDV
|
|---|
| |