Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2200 |
Symbol | |
ID | 8530600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2392127 |
End bp | 2393017 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003259577 |
Protein GI | 261821471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.467118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAA ACAGAATGCT GGGGTTAGCC TATATCTCCC CCTATATTAT AGGGCTGATA GTTTTTACCG CTTTCCCCTT TGTTTCGTCA TTTATCCTCA GTTTTACTGA GTATGATTTG ATAAATCCAC CTGAATTTAC GGGGTTAGAA AACTATCACC GCATGTTCCT GGAGGATGAT CTCTTTTGGA AATCAATGGG CGTCACCTTT GCCTATGTAT TTCTGACCAT TCCACTGAAA TTAATCTTCG CGCTGTTAAT TGCGTTTGTA CTTAATTTCA AATTACGTGG TATCGGTTTC TTCCGTACTG CTTACTATGT GCCTTCTATT CTGGGTAGCA GCGTGGCAAT CGCCGTTTTG TGGCGTGCAC TGTTCGCCAT CGATGGTTTG TTAAACAGCT TCCTCGCCGT GTTTGGCTTT GACGCTATCA ACTGGCTGGG CGAACCTTCG CTGGCACTGA TGTCGGTAAC CTTGCTGCGC GTATGGCAGT TCGGTTCCGC GATGGTTATT TTCCTGGCTG CATTGCAGAA CGTTCCGCAA TCACAGTATG AAGCCGCCAT GATCGACGGT GCATCCAAAT GGCAAATGTT CCTGAAAGTA ACAGTACCGC TAATTACGCC CGTTATTTTC TTTAACTTTA TCATGCAGAC CACTCAGGCA TTTCAGGAGT TTACGGCACC TTACGTCATT ACCGGCGGCG GTCCAACGCA CTACACCTAC CTGTTCTCGC TCTATATCTA TGATACGGCG TTCAAGTATT TCGATATGGG CTATGGTGCT GCGTTAGCAT GGGTTCTGTT CCTGGTTGTT GCAGTATTTG CGTCGATCTC CTTTAAGTCG TCGAAATACT GGGTGTTCTA CTCCGCTGAT AAAGGAGGAA AAAATGGCTG A
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Protein sequence | MNENRMLGLA YISPYIIGLI VFTAFPFVSS FILSFTEYDL INPPEFTGLE NYHRMFLEDD LFWKSMGVTF AYVFLTIPLK LIFALLIAFV LNFKLRGIGF FRTAYYVPSI LGSSVAIAVL WRALFAIDGL LNSFLAVFGF DAINWLGEPS LALMSVTLLR VWQFGSAMVI FLAALQNVPQ SQYEAAMIDG ASKWQMFLKV TVPLITPVIF FNFIMQTTQA FQEFTAPYVI TGGGPTHYTY LFSLYIYDTA FKYFDMGYGA ALAWVLFLVV AVFASISFKS SKYWVFYSAD KGGKNG
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