| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1606 |
|---|
| Symbol | |
|---|
| ID | 6119434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1680227 |
|---|
| End bp | 1681108 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641649590 |
|---|
| Product | ABC transporter sugar permease |
|---|
| Protein accession | YP_001776145 |
|---|
| Protein GI | 170730712 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGGG CTTCTTTGGT GGGCTGGGTG TTTGCTGGTC CTGCGGTGTT GGTGATCGGG
ATGTTCTTCG GTGTGCCGGT GTTGATGGGG TTGGTGCTCA GTTTGAGCGA TTTCGATTTG
TATGCTCTGG GCAATCCGAT GTATCTGCGC TTTGTTGGAT TGGATAATTA TCTGGAGTTG
TTGCACACCC CGTTGTTCTG GAAGTCGCTG TGGAATACGA CCTATTTTGT GCTGCTGGGG
ATGCCGATGT CGATTACGGT GTCGCTGGGA GCTGCGTTGC TGCTGAATTC AAGAGCGGCG
CGTTTTAAGG GATTGTTTCG CACCGTGTTG TTTGCTCCGG TGGTGACGAC GCTGGTTGCT
GTCGCGTTGA TTTGGCGTTA TCTGTTTCAC CTGAAGTATG GGGTGGTGAA TTGGCTGCTG
AATTGTGTTG GTATTCATCC AATTGATTGG TTGGGTGATC CGCGTTTGGC GATGTCGATG
ATCATGTTGT TCGCGGTGTG GAAGAACTTT GGCTACAACA TGGTGATTTT TTTGGCAGGG
TTGCAGGCGA TTCCACAGGA TCTGTACGAG GCTGCGCGCA TTGATGGCGC GTCCAAATGG
CAGCAATTCT TACATATCAC GTTGCCGATG CTGGGGCCTG TGCTGATGGT GGTTGGGATT
ATCACGGTAT CCGGCTATTT CCAGTTGTTT GCAGAGCCTT ATGTGATGAC CCGAGGGGAT
CCTCTACAGA GTACGGTCAG TGTGCTGTAT TTCATGTTTG AGGAGGGTTT TAAGTGGTGG
AATCTGGGAC GTGCTTCTGC TGTCGCGTTT CTGTTGTTTT TGGTTGTTCT TGGGGTGACG
ACGTTGATGC TGTGTGCTGG ACGTAGGAAA GATTTGGTAT GA
|
|---|
| Protein sequence | MRRASLVGWV FAGPAVLVIG MFFGVPVLMG LVLSLSDFDL YALGNPMYLR FVGLDNYLEL
LHTPLFWKSL WNTTYFVLLG MPMSITVSLG AALLLNSRAA RFKGLFRTVL FAPVVTTLVA
VALIWRYLFH LKYGVVNWLL NCVGIHPIDW LGDPRLAMSM IMLFAVWKNF GYNMVIFLAG
LQAIPQDLYE AARIDGASKW QQFLHITLPM LGPVLMVVGI ITVSGYFQLF AEPYVMTRGD
PLQSTVSVLY FMFEEGFKWW NLGRASAVAF LLFLVVLGVT TLMLCAGRRK DLV
|
|---|
| |