More than 300 homologs were found in PanDaTox collection
for query gene Smal_2682 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  100 
 
 
293 aa  583  1.0000000000000001e-165  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  89.76 
 
 
294 aa  520  1e-146  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  80.2 
 
 
293 aa  478  1e-134  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  79.18 
 
 
293 aa  473  1e-132  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  58.54 
 
 
294 aa  337  9.999999999999999e-92  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  59.03 
 
 
287 aa  319  3.9999999999999996e-86  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  46.07 
 
 
291 aa  267  1e-70  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  44.68 
 
 
314 aa  245  6e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  44.01 
 
 
353 aa  228  9e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  42.76 
 
 
319 aa  226  3e-58  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
NC_013235  Namu_0513  binding-protein-dependent transport systems inner membrane component  43.1 
 
 
314 aa  220  1.9999999999999999e-56  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  41.49 
 
 
306 aa  219  6e-56  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  42.09 
 
 
307 aa  209  3e-53  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  42.09 
 
 
307 aa  209  3e-53  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
309 aa  208  9e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  40.14 
 
 
300 aa  206  5e-52  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012028  Hlac_2863  binding-protein-dependent transport systems inner membrane component  42.96 
 
 
356 aa  205  6e-52  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  37.76 
 
 
299 aa  205  6e-52  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  40.28 
 
 
317 aa  204  1e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  39.73 
 
 
309 aa  202  5e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
294 aa  201  9e-51  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  39.29 
 
 
310 aa  201  9.999999999999999e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  39.58 
 
 
288 aa  199  5e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  40.14 
 
 
306 aa  199  6e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  41.89 
 
 
297 aa  199  6e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
305 aa  197  1.0000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
313 aa  196  3e-49  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  40.14 
 
 
293 aa  196  5.000000000000001e-49  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
318 aa  196  5.000000000000001e-49  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
311 aa  195  6e-49  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  39.38 
 
 
318 aa  195  6e-49  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  40.91 
 
 
292 aa  194  1e-48  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  39.5 
 
 
306 aa  194  1e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  38.65 
 
 
317 aa  194  1e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  42.32 
 
 
420 aa  194  2e-48  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  34.83 
 
 
309 aa  194  2e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  42.32 
 
 
420 aa  194  2e-48  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  40.07 
 
 
320 aa  193  3e-48  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
316 aa  193  3e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
299 aa  193  3e-48  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  34.49 
 
 
320 aa  192  4e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  37.54 
 
 
317 aa  192  4e-48  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  42.21 
 
 
294 aa  190  2e-47  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  38.19 
 
 
307 aa  191  2e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
308 aa  191  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  35.52 
 
 
308 aa  189  2.9999999999999997e-47  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  39.21 
 
 
306 aa  190  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1616  binding-protein-dependent transport systems inner membrane component  38.98 
 
 
429 aa  189  4e-47  Thermosipho melanesiensis BI429  Bacteria  normal  0.225919  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
316 aa  189  5e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
315 aa  188  7e-47  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
325 aa  187  1e-46  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
321 aa  187  1e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  35.89 
 
 
298 aa  186  4e-46  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  37.19 
 
 
314 aa  185  9e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  40.77 
 
 
290 aa  184  1.0000000000000001e-45  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_010003  Pmob_0827  binding-protein-dependent transport systems inner membrane component  38.67 
 
 
299 aa  184  1.0000000000000001e-45  Petrotoga mobilis SJ95  Bacteria  normal  0.175132  n/a   
 
 
-
 
NC_012852  Rleg_6113  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
286 aa  184  2.0000000000000003e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.453278  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
295 aa  184  2.0000000000000003e-45  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
294 aa  183  3e-45  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  37.77 
 
 
305 aa  183  3e-45  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
295 aa  183  3e-45  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  41.98 
 
 
319 aa  183  4.0000000000000006e-45  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
311 aa  182  6e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  39.85 
 
 
292 aa  181  1e-44  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  40.43 
 
 
322 aa  181  2e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  35.64 
 
 
289 aa  180  2e-44  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_011371  Rleg2_6525  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
286 aa  181  2e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.728774  normal  0.302995 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
309 aa  180  2e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
325 aa  180  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
293 aa  180  2.9999999999999997e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
305 aa  179  2.9999999999999997e-44  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_013205  Aaci_0077  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
311 aa  180  2.9999999999999997e-44  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
314 aa  180  2.9999999999999997e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
292 aa  179  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  37.16 
 
 
290 aa  179  4.999999999999999e-44  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
296 aa  179  5.999999999999999e-44  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
321 aa  179  7e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0395  binding-protein-dependent transport systems inner membrane component  39 
 
 
436 aa  179  7e-44  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  41.13 
 
 
294 aa  178  9e-44  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
317 aa  178  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
317 aa  177  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  40.14 
 
 
318 aa  177  1e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
313 aa  177  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  40.25 
 
 
311 aa  177  1e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
305 aa  178  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
310 aa  177  2e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  36.8 
 
 
297 aa  177  2e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
310 aa  177  2e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  39.32 
 
 
312 aa  176  3e-43  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
296 aa  177  3e-43  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  35.4 
 
 
311 aa  176  3e-43  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
296 aa  176  5e-43  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  39.51 
 
 
316 aa  176  5e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013946  Mrub_0044  binding-protein-dependent transport systems inner membrane component  41.79 
 
 
304 aa  176  5e-43  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  37.46 
 
 
287 aa  175  6e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  35.52 
 
 
296 aa  175  7e-43  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  35.52 
 
 
296 aa  175  7e-43  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
315 aa  174  9.999999999999999e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_009429  Rsph17025_3551  binding-protein-dependent transport systems inner membrane component  38.25 
 
 
301 aa  175  9.999999999999999e-43  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.963791  normal 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
305 aa  175  9.999999999999999e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
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