More than 300 homologs were found in PanDaTox collection
for query gene Bfae_29330 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  100 
 
 
321 aa  637    Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  65.48 
 
 
318 aa  407  1.0000000000000001e-112  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  58.05 
 
 
300 aa  380  1e-104  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  40.67 
 
 
309 aa  231  2e-59  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  43.19 
 
 
321 aa  225  7e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  42.67 
 
 
305 aa  225  8e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  43 
 
 
316 aa  224  2e-57  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  42.95 
 
 
316 aa  222  4.9999999999999996e-57  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  43.24 
 
 
315 aa  222  4.9999999999999996e-57  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  41.36 
 
 
309 aa  221  9.999999999999999e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  43.75 
 
 
285 aa  220  1.9999999999999999e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  40.96 
 
 
313 aa  218  1e-55  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  41.75 
 
 
307 aa  216  5e-55  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  41.75 
 
 
307 aa  216  5e-55  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  40.44 
 
 
299 aa  213  2.9999999999999995e-54  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  39.03 
 
 
317 aa  213  3.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  39.36 
 
 
305 aa  211  1e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  40.94 
 
 
314 aa  211  2e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  41.61 
 
 
318 aa  208  1e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  43.05 
 
 
316 aa  208  1e-52  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
305 aa  207  2e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  41.54 
 
 
306 aa  207  3e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
317 aa  205  8e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  41.7 
 
 
291 aa  204  1e-51  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  39.35 
 
 
320 aa  202  5e-51  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  39.64 
 
 
283 aa  202  6e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  37.58 
 
 
314 aa  198  1.0000000000000001e-49  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  39.14 
 
 
309 aa  197  1.0000000000000001e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  37.71 
 
 
321 aa  197  2.0000000000000003e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  40.65 
 
 
307 aa  197  2.0000000000000003e-49  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  37.78 
 
 
296 aa  196  5.000000000000001e-49  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  34.74 
 
 
315 aa  195  8.000000000000001e-49  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
294 aa  195  1e-48  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
317 aa  194  1e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  37.92 
 
 
314 aa  193  3e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  37.24 
 
 
313 aa  193  4e-48  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  37.71 
 
 
316 aa  193  4e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  35.27 
 
 
314 aa  192  8e-48  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  35.27 
 
 
314 aa  192  8e-48  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  39.16 
 
 
306 aa  192  9e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
308 aa  192  9e-48  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
317 aa  191  1e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
316 aa  191  2e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  38.23 
 
 
306 aa  191  2e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  38.74 
 
 
331 aa  190  2.9999999999999997e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_013131  Caci_7905  binding-protein-dependent transport systems inner membrane component  35.45 
 
 
336 aa  189  4e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
306 aa  189  4e-47  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  38.38 
 
 
301 aa  189  5.999999999999999e-47  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  37.72 
 
 
305 aa  189  5.999999999999999e-47  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  37.98 
 
 
300 aa  188  1e-46  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  38.13 
 
 
292 aa  188  1e-46  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  39.12 
 
 
302 aa  188  1e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  39.38 
 
 
296 aa  187  2e-46  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  38.03 
 
 
308 aa  186  4e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  39.05 
 
 
275 aa  186  4e-46  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
299 aa  186  5e-46  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
317 aa  185  7e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  34.31 
 
 
318 aa  185  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  38.81 
 
 
292 aa  183  4.0000000000000006e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  37.42 
 
 
321 aa  182  5.0000000000000004e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  34.69 
 
 
328 aa  182  5.0000000000000004e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
318 aa  182  6e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
294 aa  182  6e-45  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
310 aa  182  7e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  34.38 
 
 
325 aa  182  7e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  37.29 
 
 
321 aa  182  7e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
325 aa  182  8.000000000000001e-45  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  39.66 
 
 
309 aa  182  1e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  37.73 
 
 
320 aa  181  2e-44  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  37.89 
 
 
293 aa  181  2e-44  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
316 aa  180  2e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0514  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
335 aa  181  2e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.950902  normal 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  37.92 
 
 
307 aa  181  2e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  38.23 
 
 
299 aa  180  2.9999999999999997e-44  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
292 aa  180  2.9999999999999997e-44  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
318 aa  180  2.9999999999999997e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  37.94 
 
 
307 aa  180  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  35.46 
 
 
311 aa  180  2.9999999999999997e-44  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  36.05 
 
 
311 aa  180  2.9999999999999997e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
314 aa  180  2.9999999999999997e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  38.31 
 
 
297 aa  179  4e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  40 
 
 
310 aa  179  4e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  36.58 
 
 
298 aa  180  4e-44  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
322 aa  179  5.999999999999999e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  36.81 
 
 
317 aa  179  5.999999999999999e-44  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
315 aa  179  7e-44  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  40.55 
 
 
315 aa  179  8e-44  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
295 aa  178  9e-44  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
293 aa  178  9e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
326 aa  178  9e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
316 aa  178  1e-43  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
353 aa  178  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  37.72 
 
 
307 aa  177  1e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_014212  Mesil_2465  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
296 aa  177  2e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.603266  normal  0.170133 
 
 
-
 
NC_009523  RoseRS_3621  binding-protein-dependent transport systems inner membrane component  35.05 
 
 
335 aa  177  2e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2645  binding-protein-dependent transport systems inner membrane component  37.75 
 
 
311 aa  177  2e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  40.15 
 
 
287 aa  176  3e-43  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
310 aa  177  3e-43  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
319 aa  176  4e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  37.73 
 
 
310 aa  176  4e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
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