| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4319 |
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| Symbol | |
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| ID | 8335673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4902769 |
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| End bp | 4903707 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957422 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003115024 |
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| Protein GI | 256393460 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.778687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00185272 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACATC TCGCCGAACC AGCGGCCGAC GCCCCGGCGC GGCCGCGCGG ACCGGAGCGC
CGGGGCAGGA GCCGGCGGTC CCGGTTCAAC CCCGCGTACC TGTTCGTCGC GCCCGCGTTC
CTGCTGGCCG CCGTGTTCAT CGTGTGGCCG ATCGTCCAGT CGGGCTGGAT GAGCCTGCAC
GATTGGACGA TCGGCGACGG CTCGCACAAG TGGCTGGGCT TCGGGAACTA CACCGAGCTC
TTTCACGACT CACGCTTCTG GAACGCCCTG AAGGTGACGC TCGTGTACGC CGTCTTCGTC
GTCGTCGGCC AGGTGGCGAT CGGCCTGGCG CTGGCCCAGT GGCTGCGCCG GACCACCTGG
TACACGATGC TGCTGCGCTC GGCGTTCTTC TTCCCGACGA TCGCCTCGCT GGCCGTGTCC
GGCATCGTCT GGAAGTTCCT GCTGGACCCG CAGGTCGGGC TCGTCGACGG CTGGCTCGGC
AAGCTGGGCT TCCCCACACA AGCCTGGTTG CAGGACACGC ATCTGGCGCT GCCCGCGCTG
ATCGTGGTCG GGATCTGGAA GAACTTCGGG TTCTCGATGA TCGTCCTGCT CGCCGGGGTC
CAGGGGGTCA GCAGGGAACT GCTGGAGGCC GCGACGCTGG ACGGCGCCGG CGCGATCGCG
CGGTTCCGGC ACGTCACACT GCCCGCCCTG CGTCCGGCGA TCCTGTTCAC GGTCGTGATC
GGCACGGTCA ACGCCCTGCA ACTGTTCGAC CTGACGTACG TGATGACCGA CGGCGGTCCG
CTGTTCCACA CCGAGTCCAT CGTCATGTAC CTCTACCAGC GCGGATTCGT CGACTTCCGG
CTCGGCTACG CCAGTGCGAT CGCCTGGGTG CTGTTCCTGA TCATCATCGC CGTGTCCGTC
GTGCAACTCC GAATGCTGAG GTACCGCGAT GACGACTGA
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| Protein sequence | MAHLAEPAAD APARPRGPER RGRSRRSRFN PAYLFVAPAF LLAAVFIVWP IVQSGWMSLH
DWTIGDGSHK WLGFGNYTEL FHDSRFWNAL KVTLVYAVFV VVGQVAIGLA LAQWLRRTTW
YTMLLRSAFF FPTIASLAVS GIVWKFLLDP QVGLVDGWLG KLGFPTQAWL QDTHLALPAL
IVVGIWKNFG FSMIVLLAGV QGVSRELLEA ATLDGAGAIA RFRHVTLPAL RPAILFTVVI
GTVNALQLFD LTYVMTDGGP LFHTESIVMY LYQRGFVDFR LGYASAIAWV LFLIIIAVSV
VQLRMLRYRD DD
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