More than 300 homologs were found in PanDaTox collection
for query gene Bcav_4197 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  100 
 
 
326 aa  642    Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  50.33 
 
 
316 aa  327  2.0000000000000001e-88  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  50 
 
 
319 aa  311  7.999999999999999e-84  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
309 aa  204  2e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
306 aa  195  9e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  38.69 
 
 
275 aa  192  5e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
308 aa  192  5e-48  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  35.39 
 
 
316 aa  191  2e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  36.67 
 
 
307 aa  189  4e-47  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
307 aa  189  4e-47  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  39.36 
 
 
310 aa  189  5e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  42.91 
 
 
316 aa  189  8e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
313 aa  188  1e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
309 aa  185  8e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
305 aa  184  2.0000000000000003e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  38.46 
 
 
287 aa  181  2e-44  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
309 aa  181  2e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  36.61 
 
 
292 aa  179  4.999999999999999e-44  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
316 aa  179  5.999999999999999e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  37.17 
 
 
310 aa  178  9e-44  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  36.05 
 
 
321 aa  178  1e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  36.12 
 
 
317 aa  176  4e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
296 aa  176  6e-43  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
299 aa  174  9.999999999999999e-43  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
294 aa  172  5e-42  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
294 aa  172  5e-42  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  33.69 
 
 
321 aa  172  5.999999999999999e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
315 aa  172  6.999999999999999e-42  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  37.01 
 
 
302 aa  172  6.999999999999999e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
317 aa  172  6.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0204  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
299 aa  172  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.497209  normal  0.169553 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
316 aa  171  1e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  38.65 
 
 
312 aa  171  2e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  34.85 
 
 
291 aa  171  2e-41  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  35.77 
 
 
283 aa  170  3e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  35.84 
 
 
305 aa  170  3e-41  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
297 aa  170  3e-41  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  35.91 
 
 
300 aa  169  4e-41  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
315 aa  168  1e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_013235  Namu_1775  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
309 aa  168  1e-40  Nakamurella multipartita DSM 44233  Bacteria  normal  0.114297  normal  0.0929805 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
293 aa  168  1e-40  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
305 aa  168  1e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
315 aa  166  5.9999999999999996e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
317 aa  166  6.9999999999999995e-40  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
292 aa  165  9e-40  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  33.08 
 
 
311 aa  165  1.0000000000000001e-39  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  37.54 
 
 
306 aa  165  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
325 aa  165  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  33.81 
 
 
296 aa  164  1.0000000000000001e-39  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  33.33 
 
 
294 aa  164  2.0000000000000002e-39  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
300 aa  164  2.0000000000000002e-39  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
312 aa  163  3e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
295 aa  164  3e-39  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1637  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
303 aa  163  3e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0695484  n/a   
 
 
-
 
NC_013525  Tter_0428  binding-protein-dependent transport systems inner membrane component  31.95 
 
 
310 aa  164  3e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  33.65 
 
 
310 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  34.7 
 
 
318 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
308 aa  163  4.0000000000000004e-39  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  34.27 
 
 
293 aa  162  6e-39  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
321 aa  162  7e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  34.4 
 
 
320 aa  162  8.000000000000001e-39  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
314 aa  162  9e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  35.52 
 
 
300 aa  161  1e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  34.46 
 
 
306 aa  161  1e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  31.75 
 
 
307 aa  162  1e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
310 aa  160  2e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_011886  Achl_1752  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
314 aa  161  2e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000089983 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
293 aa  160  2e-38  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_009667  Oant_0353  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
317 aa  160  3e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0740262  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  36.22 
 
 
294 aa  159  4e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_013172  Bfae_07470  carbohydrate ABC transporter membrane protein  34.53 
 
 
304 aa  160  4e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  32.45 
 
 
317 aa  159  6e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  31.8 
 
 
318 aa  159  6e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
318 aa  159  9e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  35.63 
 
 
314 aa  158  1e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011881  Achl_4613  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
301 aa  158  1e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  37.17 
 
 
311 aa  158  1e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
306 aa  158  1e-37  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
305 aa  157  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  31.68 
 
 
314 aa  157  2e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
319 aa  157  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
353 aa  157  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_010483  TRQ2_0513  binding-protein-dependent transport systems inner membrane component  34.77 
 
 
285 aa  157  2e-37  Thermotoga sp. RQ2  Bacteria  normal  0.195932  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
308 aa  156  4e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
311 aa  156  4e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  34.72 
 
 
318 aa  156  4e-37  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
305 aa  156  4e-37  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  35.93 
 
 
288 aa  155  7e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_011366  Rleg2_5851  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
311 aa  155  7e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.421015  normal 
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  33.7 
 
 
311 aa  155  9e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
316 aa  155  1e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  34.7 
 
 
315 aa  155  1e-36  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  35.23 
 
 
307 aa  154  1e-36  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_012858  Rleg_6764  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
326 aa  155  1e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
307 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  36.26 
 
 
319 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
310 aa  154  1e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
285 aa  154  2e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_013946  Mrub_0320  binding-protein-dependent transport systems inner membrane component  38.37 
 
 
310 aa  154  2e-36  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  30.49 
 
 
310 aa  153  2.9999999999999998e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
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