| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1872 |
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| Symbol | |
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| ID | 7860494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 2136878 |
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| End bp | 2137858 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643865963 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002881890 |
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| Protein GI | 229820364 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4209] ABC-type polysaccharide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.095702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.124231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCC AGCAGACGCG CGCTCCTGAG CGGGTCGAGT CGTCCACCCC GGCGCCGCCG
GAGGTCGGAC GCCCACGCCA GGCGCGGCGG CGGTTCTGGT CGTTCCGGAC CCTCCTGCTC
ATGCTCGTTC CCGGCCTGCT CTACCTGGCG GTCTACAAGT ACGGTCCGAT GTACGGCGTC
CTCATCGCAT TCAAGGACTA CTCCATCCGT GAGGGGATCG CCGGGAGCCC CTGGGCGTCA
CCGTTCTACA CACACTTCGA GCAGTTCTGG ACGTCGCCGT ACTTCAGCAC CCTCATGACG
AACACGGTGC TGATCTCGGT GTACAAGCTC GTCGCGGGCA CCATCCCGCC GATCATCGTC
GCGCTGCTGT TCAACGAGTG TCGGCTGCGC TGGTTCCGGC GGTTGGCGCA GACCGTGAGC
TACATGCCGC ACTTCCTGTC GTGGGTGATC GTGTACGGCG TCACCATCGC ATTGCTGTCG
CAGAGCACGG GCCTCGTGAA CGGTTTCCTC CGCGACAACT TCGGCTTCAC GATCGGCTTC
CTGACCTCGA ACACGTGGTT CCGCAGCGTG CTGGTCGGCT CCGACCTGTG GAAGGACATC
GGCTGGGGCG CGATCATCTA CCTCGCCGCG ATGATCGGGA TCGACCGCAC GTTCTACGAG
GCGGCTCGCG TGGACGGCGC GGGCCGTTTC CGGCAGATCT GGCACATCAC GCTGCCCGGG
ATCCGGCCCG TCATCATCCT GCTGCTCGTC CTCAAGCTCG GGAACATCCT CGACGCCGGG
TTCGACCAGG TCTACATCTT CTACAACATC CAGGTCTATC CGACCGGCGA CATCATCGAC
ACCTGGGTCT ACCGGGCCGG TCTGGAGAAC CTGAACTACA GCCTCGCGGC GGCGGTCGGC
CTGTTCAAGT CCGTCATCGG GCTCGTGCTC ATCGTCGTCG CCAACCGCAT CGCACGACGA
TGGAGCGCGC AGCTATGGTG A
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| Protein sequence | MTLQQTRAPE RVESSTPAPP EVGRPRQARR RFWSFRTLLL MLVPGLLYLA VYKYGPMYGV
LIAFKDYSIR EGIAGSPWAS PFYTHFEQFW TSPYFSTLMT NTVLISVYKL VAGTIPPIIV
ALLFNECRLR WFRRLAQTVS YMPHFLSWVI VYGVTIALLS QSTGLVNGFL RDNFGFTIGF
LTSNTWFRSV LVGSDLWKDI GWGAIIYLAA MIGIDRTFYE AARVDGAGRF RQIWHITLPG
IRPVIILLLV LKLGNILDAG FDQVYIFYNI QVYPTGDIID TWVYRAGLEN LNYSLAAAVG
LFKSVIGLVL IVVANRIARR WSAQLW
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