| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3819 |
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| Symbol | |
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| ID | 8335172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4319877 |
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| End bp | 4320845 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644956958 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003114561 |
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| Protein GI | 256392997 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4209] ABC-type polysaccharide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.595689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.292651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCG CCGGCACCGT CGATCCACCA CCAGGGCGCG AACGGGCCCG GCCGCTCCGA
CCGCGGCGCA AGACCTGGCG CCGGGCACTG CGCCGGGACT GGCAGCTGTA TTCGCTGGCG
GTCCTGCCGG TGGTGTTCTT CGTGGTCTTC CGCTATCTGC CGATGATCGG CAACGTCATC
GCCTTCCGGC GCTACGTGCC CGGCGGCAGT CTGTTCGGCG AGAAGTGGGT CGGGCTGCGC
TACTTCCGCA TGTTCATGGG CGACCCGGAG TTCTGGCACG TCTTCGGCAA CACCATGATC
CTCGGCGGCG TGACACTCCT GTTCACCTTC CCGTTGCCGA TCGTGCTGGC GCTGCTGCTG
AACGAGGTGC GCTCGGCCAA GCTCAAGCGG TTCGTGCAGT CGGTGTCCTA CCTGCCGCAC
TTCCTGTCGA TCGTCGTCGT CGCCGGCCTG ATCATGCAGC TGCTGTCGGT CAACGGCGCG
GTGAACCAGG GGCTGCGCGC GGTCGGCCAC GCGCCGATCC CGTTCCTGCA GCAGCCCGAA
TGGTTCCGGA CCATCTACGT GTCCTCCGAG GTCTGGCAGG GCCTGGGCTG GGGAACCATC
CTGTATCTGG CGGCCCTGAC CACCATCGAC CACCAGCTCT ACGAGCAGGC CCGGATCGAC
GGCGCGAACC GCTGGCGGCA GACCTGGCAC GTCACCCTGC CCGGCATCCG GCCGATGATG
GTCACGCTGC TCGTCTTGAA CATCGGCACT TTCATGGCGG TCGGATTCGA GAAGATCCTG
CTGCTGTACA ACCCGCTGAC GTATTCCACG GCCGATGTCA TCCCGACGTA TCTGTACCGG
GTCGGCGTGG TGTCGGGCAG CTTCAGCTAC GGCGCGGCCA TCGGCCTGTT CGAGTCGGTG
ATCGGCCTGA TCCTGGTGGT CGCGGCCAAC CAGATCTCCC GGCGCGCGGT GGGGACGGGG
CTGTGGTGA
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| Protein sequence | MGIAGTVDPP PGRERARPLR PRRKTWRRAL RRDWQLYSLA VLPVVFFVVF RYLPMIGNVI
AFRRYVPGGS LFGEKWVGLR YFRMFMGDPE FWHVFGNTMI LGGVTLLFTF PLPIVLALLL
NEVRSAKLKR FVQSVSYLPH FLSIVVVAGL IMQLLSVNGA VNQGLRAVGH APIPFLQQPE
WFRTIYVSSE VWQGLGWGTI LYLAALTTID HQLYEQARID GANRWRQTWH VTLPGIRPMM
VTLLVLNIGT FMAVGFEKIL LLYNPLTYST ADVIPTYLYR VGVVSGSFSY GAAIGLFESV
IGLILVVAAN QISRRAVGTG LW
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