Gene Bfae_17870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_17870 
Symbol 
ID8400333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp2005001 
End bp2005984 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content64% 
IMG OID644997850 
ProductABC-type polysaccharide transport system, permease component 
Protein accessionYP_003155197 
Protein GI257068942 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4209] ABC-type polysaccharide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.246834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG ACACCGCCGT CGGCCCTGCA CCATCGCAGG CCCCCGCACC GCCGGAGAAG 
GCGCCGAGGA ACGCGCCTCG CCGCTCCCGG CTGCGACGCA TCCTCCAGAG CTGGCAGTTA 
TACGTACTAC TCGCGCCGGC CGTCATCTAC CTGATCGTGT TCAAGTACTG GCCGATGTAC 
GGCGCGCAGA TCGCGTTCCG CGAGTACAAC CCGATCGACG GCTTCTTCTG GAGCCCCTGG 
GTGGGCCTGG AGCACTTCGA GACCTTCATC TCGAGCTTCC AGTTCGGGCG CATCGTCGCC 
AACACGCTGA CGATCAACAC CGTCGGCCTG CTGGTGGCGT TCCCGGTCCC GATCATCCTC 
GCGCTGATCG TCAACCAGCT GCCCAGCGAG CGCTTCAAGC GGCTCACCCA GACGGTCCTC 
TACTCCCCGT CGTTCATCTC GGTGGTGGTC GTGGTCGGCA TGATCCACCT GCTGTTCTCG 
CCGAGCTCGG GCCTCGTCAA CCACATGATC TCCGCCTTCG GCGGCGAGCC CATCTTCTTC 
ATGGGCACCC CCGAGTGGTT CCGGCCGCTC TACATCGGCT CGGACGTGTG GCAGAACGCC 
GGCTTCTCGA TGATCATCTA CCTCGCCGCG CTCACCGCAA TCGATCCCTC GCTCCACGAG 
GCCGCGCGCA TGGACGGCGC GAACCGCTTC CAGCGGATCC GCCACATCGA CATCCCCGGG 
ATCCTGCCGG TGATCACGAT CCTGTTCATC CTCGCCGTGG GCAACATCTT CAACCTCGGC 
TTCGAGAAGG TCTACCTGAT GCAGACGGAC CTGAACCTGC CCACCTCCGA GGTCATCAAC 
ACCTACGTGT ACAAGGTCGG CCTGCAGGGC GCCCAGTTCA GCTACTCGGC GGCCATCGGG 
CTGTTCAACT CCGTCCTGAA CCTCCTCCTT CTGGTGACCT TCAACTGGGT CGCGAAGAAG 
GCCAACCAGT CGAGCCTGTG GTGA
 
Protein sequence
MTTDTAVGPA PSQAPAPPEK APRNAPRRSR LRRILQSWQL YVLLAPAVIY LIVFKYWPMY 
GAQIAFREYN PIDGFFWSPW VGLEHFETFI SSFQFGRIVA NTLTINTVGL LVAFPVPIIL 
ALIVNQLPSE RFKRLTQTVL YSPSFISVVV VVGMIHLLFS PSSGLVNHMI SAFGGEPIFF 
MGTPEWFRPL YIGSDVWQNA GFSMIIYLAA LTAIDPSLHE AARMDGANRF QRIRHIDIPG 
ILPVITILFI LAVGNIFNLG FEKVYLMQTD LNLPTSEVIN TYVYKVGLQG AQFSYSAAIG 
LFNSVLNLLL LVTFNWVAKK ANQSSLW