More than 300 homologs were found in PanDaTox collection
for query gene Ccel_0143 on replicon NC_011898
Organism: Clostridium cellulolyticum H10



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011898  Ccel_0143  binding-protein-dependent transport systems inner membrane component  100 
 
 
318 aa  637    Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1916  binding-protein-dependent transport systems inner membrane component  47.15 
 
 
320 aa  293  2e-78  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000481644  n/a   
 
 
-
 
NC_012034  Athe_2331  binding-protein-dependent transport systems inner membrane component  45.95 
 
 
317 aa  266  2.9999999999999995e-70  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2093  binding-protein-dependent transport systems inner membrane component  44.22 
 
 
321 aa  256  3e-67  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000858649  n/a   
 
 
-
 
NC_010001  Cphy_2656  binding-protein-dependent transport systems inner membrane component  42.06 
 
 
315 aa  254  1.0000000000000001e-66  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0773  binding-protein-dependent transport systems inner membrane component  41.56 
 
 
311 aa  254  2.0000000000000002e-66  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000000374508  n/a   
 
 
-
 
NC_013172  Bfae_29230  ABC-type polysaccharide transport system, permease component  40.06 
 
 
334 aa  249  6e-65  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0085  binding-protein-dependent transport systems inner membrane component  44.93 
 
 
318 aa  248  7e-65  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0126141  n/a   
 
 
-
 
NC_014151  Cfla_2805  binding-protein-dependent transport systems inner membrane component  40.72 
 
 
339 aa  248  8e-65  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0077711 
 
 
-
 
NC_010001  Cphy_0339  binding-protein-dependent transport systems inner membrane component  41.61 
 
 
333 aa  247  2e-64  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0929  binding-protein-dependent transport systems inner membrane component  43.58 
 
 
330 aa  246  3e-64  Clostridium phytofermentans ISDg  Bacteria  normal  0.293677  n/a   
 
 
-
 
NC_010001  Cphy_1119  binding-protein-dependent transport systems inner membrane component  39.07 
 
 
318 aa  246  4.9999999999999997e-64  Clostridium phytofermentans ISDg  Bacteria  normal  0.0757482  n/a   
 
 
-
 
NC_013525  Tter_1103  binding-protein-dependent transport systems inner membrane component  39.07 
 
 
323 aa  244  9.999999999999999e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_3315  binding-protein-dependent transport systems inner membrane component  42.28 
 
 
324 aa  244  1.9999999999999999e-63  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2054  binding-protein-dependent transport systems inner membrane component  41.03 
 
 
304 aa  242  7e-63  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3325  binding-protein-dependent transport systems inner membrane component  39.94 
 
 
334 aa  241  1e-62  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.491227  normal  0.0603947 
 
 
-
 
NC_013515  Smon_0121  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
298 aa  241  1e-62  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_20490  ABC-type polysaccharide transport system, permease component  41.69 
 
 
326 aa  240  2e-62  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.086583  normal  0.344725 
 
 
-
 
NC_014165  Tbis_1563  binding-protein-dependent transporter inner membrane component  39.46 
 
 
331 aa  238  1e-61  Thermobispora bispora DSM 43833  Bacteria  normal  0.117544  normal 
 
 
-
 
NC_011898  Ccel_0946  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
322 aa  237  2e-61  Clostridium cellulolyticum H10  Bacteria  normal  0.0463053  n/a   
 
 
-
 
NC_012034  Athe_2031  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
315 aa  236  3e-61  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3242  binding-protein-dependent transport systems inner membrane component  39.12 
 
 
310 aa  234  1.0000000000000001e-60  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1981  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
332 aa  233  2.0000000000000002e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.837533  n/a   
 
 
-
 
NC_011886  Achl_3113  binding-protein-dependent transport systems inner membrane component  42.5 
 
 
325 aa  233  4.0000000000000004e-60  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_0367  binding-protein-dependent transport systems inner membrane component  43.19 
 
 
332 aa  232  6e-60  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0312  binding-protein-dependent transport systems inner membrane component  41.58 
 
 
304 aa  232  7.000000000000001e-60  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3819  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
322 aa  232  8.000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.595689  normal  0.292651 
 
 
-
 
NC_012034  Athe_2553  binding-protein-dependent transport systems inner membrane component  42.55 
 
 
308 aa  229  6e-59  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.336984  n/a   
 
 
-
 
NC_013521  Sked_02840  ABC-type polysaccharide transport system, permease component  38.18 
 
 
324 aa  227  2e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.840845  normal 
 
 
-
 
NC_013172  Bfae_17870  ABC-type polysaccharide transport system, permease component  40.72 
 
 
327 aa  227  2e-58  Brachybacterium faecium DSM 4810  Bacteria  normal  0.246834  n/a   
 
 
-
 
NC_010001  Cphy_0485  binding-protein-dependent transport systems inner membrane component  39.79 
 
 
326 aa  226  4e-58  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0151  binding-protein-dependent transport systems inner membrane component  36.53 
 
 
323 aa  225  7e-58  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0428  binding-protein-dependent transport systems inner membrane component  37.86 
 
 
326 aa  224  1e-57  Arthrobacter sp. FB24  Bacteria  normal  0.278038  n/a   
 
 
-
 
NC_010001  Cphy_0860  binding-protein-dependent transport systems inner membrane component  39.68 
 
 
313 aa  224  2e-57  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2660  binding-protein-dependent transport systems inner membrane component  36.93 
 
 
335 aa  221  9.999999999999999e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.245622  n/a   
 
 
-
 
NC_013174  Jden_2401  binding-protein-dependent transport systems inner membrane component  41.36 
 
 
340 aa  219  3.9999999999999997e-56  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0135356  normal 
 
 
-
 
NC_010001  Cphy_2192  binding-protein-dependent transport systems inner membrane component  37.98 
 
 
307 aa  218  7.999999999999999e-56  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0059  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
320 aa  218  1e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.542171  normal  0.242962 
 
 
-
 
NC_012669  Bcav_1872  binding-protein-dependent transport systems inner membrane component  42.6 
 
 
326 aa  216  2.9999999999999998e-55  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.095702  normal  0.124231 
 
 
-
 
NC_010001  Cphy_0664  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
324 aa  216  2.9999999999999998e-55  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.00000000161767  n/a   
 
 
-
 
NC_014151  Cfla_3000  binding-protein-dependent transport systems inner membrane component  39.21 
 
 
328 aa  214  1.9999999999999998e-54  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.999287 
 
 
-
 
NC_013172  Bfae_01640  ABC-type polysaccharide transport system, permease component  37.76 
 
 
324 aa  213  2.9999999999999995e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4041  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
330 aa  213  3.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008527  LACR_0761  ABC-type polysaccharide transport system, permease component  37.07 
 
 
316 aa  212  5.999999999999999e-54  Lactococcus lactis subsp. cremoris SK11  Bacteria  hitchhiker  0.000797199  n/a   
 
 
-
 
NC_014211  Ndas_5564  binding-protein-dependent transport systems inner membrane component  35.91 
 
 
346 aa  211  9e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.271716  normal  0.315175 
 
 
-
 
NC_013521  Sked_33150  ABC-type polysaccharide transport system, permease component  37.46 
 
 
336 aa  211  1e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.96599 
 
 
-
 
NC_011898  Ccel_1014  binding-protein-dependent transport systems inner membrane component  39.75 
 
 
323 aa  210  2e-53  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0850  binding-protein-dependent transport systems inner membrane component  39.53 
 
 
312 aa  210  3e-53  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.3931  n/a   
 
 
-
 
NC_010001  Cphy_3209  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
319 aa  209  4e-53  Clostridium phytofermentans ISDg  Bacteria  normal  0.24552  n/a   
 
 
-
 
NC_013174  Jden_1768  binding-protein-dependent transport systems inner membrane component  38.01 
 
 
320 aa  206  4e-52  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0555688  normal  0.200854 
 
 
-
 
NC_013411  GYMC61_2708  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
315 aa  203  3e-51  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0393  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
326 aa  202  6e-51  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0410  binding-protein-dependent transport systems inner membrane component  37.19 
 
 
331 aa  202  7e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0705285 
 
 
-
 
NC_013172  Bfae_04190  ABC-type polysaccharide transport system, permease component  36.39 
 
 
313 aa  201  9.999999999999999e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1581  binding-protein-dependent transport systems inner membrane component  36.39 
 
 
305 aa  200  1.9999999999999998e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.595775  normal 
 
 
-
 
NC_013526  Tter_1992  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
327 aa  199  5e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0281  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
315 aa  198  7.999999999999999e-50  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.949472 
 
 
-
 
NC_012669  Bcav_1320  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
327 aa  198  1.0000000000000001e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_10090  ABC-type polysaccharide transport system, permease component  36.54 
 
 
331 aa  198  1.0000000000000001e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1292  transmembrane lipoprotein  34.7 
 
 
340 aa  196  5.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.817448 
 
 
-
 
NC_011898  Ccel_1253  binding-protein-dependent transport systems inner membrane component  39.8 
 
 
300 aa  193  3e-48  Clostridium cellulolyticum H10  Bacteria  normal  0.601892  n/a   
 
 
-
 
NC_010001  Cphy_2732  binding-protein-dependent transport systems inner membrane component  38.19 
 
 
316 aa  192  6e-48  Clostridium phytofermentans ISDg  Bacteria  normal  0.0340422  n/a   
 
 
-
 
NC_007333  Tfu_1610  putative transport system integral membrane protein  33.87 
 
 
341 aa  192  9e-48  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3569  binding-protein-dependent transport systems inner membrane component  31.66 
 
 
324 aa  190  2.9999999999999997e-47  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2171  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
324 aa  188  1e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4681  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
310 aa  187  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00295974  normal  0.937314 
 
 
-
 
NC_010001  Cphy_0695  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
288 aa  185  7e-46  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000207262  n/a   
 
 
-
 
NC_012669  Bcav_1438  binding-protein-dependent transport systems inner membrane component  38.12 
 
 
335 aa  184  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.650576  normal 
 
 
-
 
NC_012669  Bcav_3386  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
332 aa  181  1e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2785  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
351 aa  181  2e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_13600  ABC-type polysaccharide transport system, permease component  34.19 
 
 
332 aa  177  2e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  0.248364  n/a   
 
 
-
 
NC_013131  Caci_0128  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
319 aa  174  9.999999999999999e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6722  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
350 aa  174  1.9999999999999998e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.14041  normal 
 
 
-
 
NC_008261  CPF_2339  ABC transporter, permease protein  34.28 
 
 
322 aa  174  2.9999999999999996e-42  Clostridium perfringens ATCC 13124  Bacteria  normal  0.552195  n/a   
 
 
-
 
NC_013521  Sked_05740  ABC-type polysaccharide transport system, permease component  36.3 
 
 
346 aa  170  3e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.767315  normal 
 
 
-
 
NC_008262  CPR_2051  sugar transport system (permease) (binding protein dependent transporter)  35.03 
 
 
308 aa  169  4e-41  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5753  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
329 aa  169  6e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.623467  normal 
 
 
-
 
NC_013171  Apre_0144  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
333 aa  169  7e-41  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4937  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
339 aa  167  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00187301  normal 
 
 
-
 
NC_010001  Cphy_2571  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
321 aa  166  5e-40  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1709  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
307 aa  164  2.0000000000000002e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1715  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
316 aa  163  3e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2456  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
316 aa  162  5.0000000000000005e-39  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0595  binding-protein-dependent transport systems inner membrane component  32.66 
 
 
313 aa  160  3e-38  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1547  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
478 aa  159  6e-38  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000265018  n/a   
 
 
-
 
NC_013530  Xcel_1190  binding-protein-dependent transport systems inner membrane component  31.5 
 
 
292 aa  137  2e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0859971  n/a   
 
 
-
 
NC_013530  Xcel_0064  binding-protein-dependent transport systems inner membrane component  29.3 
 
 
317 aa  124  2e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  27.39 
 
 
309 aa  123  5e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  29.43 
 
 
319 aa  118  9.999999999999999e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
316 aa  117  1.9999999999999998e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  26.96 
 
 
298 aa  117  1.9999999999999998e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3702  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
327 aa  117  3e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.042733  normal 
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
324 aa  116  5e-25  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_013131  Caci_8465  binding-protein-dependent transport systems inner membrane component  25.87 
 
 
315 aa  112  9e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.511569  normal  0.0740219 
 
 
-
 
NC_010001  Cphy_3316  binding-protein-dependent transport systems inner membrane component  29.59 
 
 
298 aa  111  1.0000000000000001e-23  Clostridium phytofermentans ISDg  Bacteria  normal  0.164411  n/a   
 
 
-
 
NC_012669  Bcav_4197  binding-protein-dependent transport systems inner membrane component  28.26 
 
 
326 aa  111  2.0000000000000002e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.979447  normal 
 
 
-
 
NC_013947  Snas_4694  binding-protein-dependent transport systems inner membrane component  28.68 
 
 
306 aa  108  8.000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.626681 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  29.01 
 
 
309 aa  105  9e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  28.62 
 
 
311 aa  104  2e-21  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  28.91 
 
 
283 aa  104  2e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
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