Gene Athe_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2054 
Symbol 
ID7408267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2168417 
End bp2169331 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content35% 
IMG OID643716421 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002573904 
Protein GI222530022 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4209] ABC-type polysaccharide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT CAAAATTGAC CAAAACATTG TGGAAACAAA GATATCTAAT CTTAATGATA 
TTTCCATTTA TTGTTTGGTT AATAATATTT AGATACATAC CCCTTTGGGG ATGGATAATG
GCATTTCAAG ATTACAGACC TGGAAAACCA ATTTGGCAAC AAGAGTGGGT AGGTATAAGA
TGGTTTGCTG AGATGTTCCA GGATCCTGAT TTTTATAAGG CTATGCGAAA TACACTGATA
ATGAGCTTTA TGGGATTAGT ATTTGGCTTT CCGCTGCCAA TAATGTTAGC TTTACTTCTA
AATGAAATAA AGAATATGGC ATTTAAGAGG ACTGTCCAAA CAATTTCATA TCTTCCCCAC
TTTGTTTCGT GGGTTGTTGT TGCAAGTTTG GTAAGTGAGA TTTTGTCCCC AAGCGGTGTT
ATAAATCAAG TCTTGCAAAA ACTCCATTTG ACAAATTACC CGATTATGTT TATGGCAGAA
CCACGTTATT TTTGGTGGAT AGTTACATTT TCTGACATTT GGAAAGAACT TGGTTGGAAC
ACGATAATTT ATTTAGCAGC GATAACTTCA ATAAATCCTG AACTTTACGA AGCTGCAACT
GTTGATGGTG CAGGAAGATT CAGAAAAATG ATAAATATTA CCCTTCCCGG AATAATGCCA
ACCGTTATTG TTCTTCTTAT TTTAAGCATA GGAAATATAA TCAATATAGG TTTTGAAAGA
CAGTTTCTTT TAAGAACAGC AGCAACAAGA GAAGTTGCGG ATGTCATTGA CCTTTACATT
CTTTCGTATG GAATTGGCAC AGGTAGATAT TCTTTTGGCA CAGCTGCAGG TGTTTTCAAA
TCAGTAGTAA GCCTTACACT TTTGGTTTTT GCAAACTGGC TTTCCAAAAA GACAACTGGC
TATAGGATGA TGTGA
 
Protein sequence
MNKSKLTKTL WKQRYLILMI FPFIVWLIIF RYIPLWGWIM AFQDYRPGKP IWQQEWVGIR 
WFAEMFQDPD FYKAMRNTLI MSFMGLVFGF PLPIMLALLL NEIKNMAFKR TVQTISYLPH
FVSWVVVASL VSEILSPSGV INQVLQKLHL TNYPIMFMAE PRYFWWIVTF SDIWKELGWN
TIIYLAAITS INPELYEAAT VDGAGRFRKM INITLPGIMP TVIVLLILSI GNIINIGFER
QFLLRTAATR EVADVIDLYI LSYGIGTGRY SFGTAAGVFK SVVSLTLLVF ANWLSKKTTG
YRMM