| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_04190 |
|---|
| Symbol | |
|---|
| ID | 8398967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 484861 |
|---|
| End bp | 485802 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644996507 |
|---|
| Product | ABC-type polysaccharide transport system, permease component |
|---|
| Protein accession | YP_003153882 |
|---|
| Protein GI | 257067627 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4209] ABC-type polysaccharide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGTCGG GCCCCCGGCG GCCGAAGAAG TCCCTGAGTG CGCGACTGCG CCGGGACTGG
CAGATGCTGG TGCTGATGAT CCCCGGCGCG CTGGCGCTGC TGTTCTTCTT CTACATCCCG
ATCCTCGGCA ACGTCATCGC CTTCCAGGAC TACCAGCCCT ACCTCGAAAT CACCGAAGCG
CCGTTCGTCG GCTTCTCGAA ATTCACAGAG CTGTTCCAGG ACGACCGCTT CGTGCTGGCG
CTGCGCAACA CGCTGGTCTA CGCCGCGTTC CAGCTCGTGC TGTTCTTCCC GCTGCCGATC
CTGCTGGCGC TCATCGTCGA CTCGATGATG AGCCAGCGGC TGCGCAAGGC GTTCCAGTCG
ATCGTGTACC TGCCGCACTT CCTCTCCTGG GTGCTGGTCA TCGCGCTGTT CCAGCAGATG
CTCGGCGGCG CGGGCCTCAT CAACCAGGCG ATGGTCAGCT CCGGGCTCGA TCCCATCCCC
TTCATGACCA ACTCGGACTC CTTCGCACTG CTGATCGTCG CGGAGATCGC CTGGAAGGAC
GCGGGCTGGG GGATGATCAT CTTCCTCGCG GCCCTGGCAT CGATCGACCA GTCGCTCTAC
GAGTCCGCGG CCTCCGATGG CGCCGGCCGC GTGCGCCGTA CCTGGCACAT CACCCTTCCC
GGCATGCGCC CGGTGATCGT GTTGCTGCTC ATCCTGAACC TCGGCTCGAT CCTCACCGTC
GGCTTCGAGC AGTTCATCCT CCAGCGCGAT GCCGTCGGCG CGGACACCGC CGAAGTGCTG
GACACCTACT CGTACTACAC CGGCGTCATC GGCGGCGACT GGTCGGTCGG TGCCGCGGCG
GGACTCGCCA AGGGTGTCGT CGGCACCATC CTCATCATCC TGGCCAACAA GGTCGCCCAC
CTCCTCGGTG AGGACGGCAT CTACCGCGGG AGGCCCCAGT GA
|
|---|
| Protein sequence | MRSGPRRPKK SLSARLRRDW QMLVLMIPGA LALLFFFYIP ILGNVIAFQD YQPYLEITEA
PFVGFSKFTE LFQDDRFVLA LRNTLVYAAF QLVLFFPLPI LLALIVDSMM SQRLRKAFQS
IVYLPHFLSW VLVIALFQQM LGGAGLINQA MVSSGLDPIP FMTNSDSFAL LIVAEIAWKD
AGWGMIIFLA ALASIDQSLY ESAASDGAGR VRRTWHITLP GMRPVIVLLL ILNLGSILTV
GFEQFILQRD AVGADTAEVL DTYSYYTGVI GGDWSVGAAA GLAKGVVGTI LIILANKVAH
LLGEDGIYRG RPQ
|
|---|
| |