| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4937 |
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| Symbol | |
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| ID | 8336291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5635299 |
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| End bp | 5636318 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958036 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003115638 |
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| Protein GI | 256394074 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4209] ABC-type polysaccharide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00187301 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTGA TGGCGGACGG CGCGGCCGTG CCGGAGGAAG CGAGGCCTCG GCCGGAGGCG
CCGCCGGGCA GGCGGGAGAA CGCCGGCCCG GCTCCGGCTC GGCCGGCGCG CGGGCTGAGC
CGGTGGGCGC GGCTGCGGCG GGACCGGTCT CTGCTGCTCA TGATCGCCCC GGCGATGCTC
GTGCTGCTGG TCTTCGCATA CCTGCCGATG TTCGGGACGA TCTCGGCGTT CGAGTACTAC
GACCCCATCT ACGGGTTCTT CCACAGCAAC TGGGTCGGCC TGAAGAACTT CACCGACCTG
ATGGCCGACC CGGCGTTCTG GCACGCGTTC GAGAACACCT TGGTGCTGAG CCTGGTCTCG
CTCGTCTTGT ACTTCCCGAT CCCGGTCGCG CTGGCGCTGC TGCTGAACAC CGTGATCAGC
ACCAAGCTCC GGTCCTTCAT CCAGGCCGTG GTCTACCTCC CGCACTTCTT CTCCTGGGTG
CTGGTCATCA CCGTCTTCAA CCAGATGCTC GGCGGCGCCG GCCTGCTCAA CCAGTTCCTG
CGCCAGCACC ACATGGCGAC CTGGAACATC ATGTCCAGCG GGTCGGCGTT CAAGTACCTG
GTGACCTTCG AGTCGGTGTG GAAGGAGGCC GGCTGGGGGA TCATCGTCTT CTTGGCCGCG
CTGGCCGCCA TCGACCCGGC CCTGTACGAG TCGGCCGCGG TGGACGGGGC GAGCCGCTGG
CGGCGGATGT GGCACATCAC GCTGCCGGGG ATGCGCGGCA TGATTGTCCT GATGCTGGTC
CTGCGCTTGG GCAACGCGCT TAACGTCGGT TTCGAGCAGA TGCTCATCCA GCGCCAGGCG
GTCGGAGCCC AACACGCCGA AGTCCTGGAC ACGTTCGCCT ACTTCTACGG GATCGGCAAC
GGCAACTTCG GCTACGGAGC GGCGGCCGGC CTGTTCAAAG GCATCATCTC CCTGATTTTG
ATCTTCGCGG CCAACAAGAT GGCGCACAAG TTCGGTGAGG ACGGGTTGTA CCGCAAATGA
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| Protein sequence | MAVMADGAAV PEEARPRPEA PPGRRENAGP APARPARGLS RWARLRRDRS LLLMIAPAML
VLLVFAYLPM FGTISAFEYY DPIYGFFHSN WVGLKNFTDL MADPAFWHAF ENTLVLSLVS
LVLYFPIPVA LALLLNTVIS TKLRSFIQAV VYLPHFFSWV LVITVFNQML GGAGLLNQFL
RQHHMATWNI MSSGSAFKYL VTFESVWKEA GWGIIVFLAA LAAIDPALYE SAAVDGASRW
RRMWHITLPG MRGMIVLMLV LRLGNALNVG FEQMLIQRQA VGAQHAEVLD TFAYFYGIGN
GNFGYGAAAG LFKGIISLIL IFAANKMAHK FGEDGLYRK
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