| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4681 |
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| Symbol | |
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| ID | 8336035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5331091 |
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| End bp | 5332023 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644957781 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003115383 |
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| Protein GI | 256393819 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4209] ABC-type polysaccharide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00295974 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.937314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGGC GGATCCGGCT GCGCAGGGAC AAGTCCCTGC TGCTGATGAC GATCCCGGCC
CTGGCGCTGC TGCTGGTGTT CAACTACCTG CCGATGGCCG GCATCATCGT GGCCTTCGAG
CACTACGACA TCTACCAGGG CCTGGTCCAC AGCGACTTCG TCGGGCTGGA CGAGTTCCGC
CAGCTGGTCG CCAACCCCGA CTTCTGGCAC GCGTTCGAGA ACACGCTGGT GATCAGCTTC
GTCCAGCTGG TCCTGTACTT CCCGCTCCCG ATCGCGCTGG CCCTGATGGT CAACACGGTG
CTCAGTTCGA AGGTCCGCGG CTTCATCCAG GCCGTGGTGT ACCTGCCGCA CTTCTTCTCC
TACGTGCTGG TCATCACGAT CTTCCAGGAG TTCCTCGGCG GCGCGGGCGT GCTGAACGTG
TTCCTGAACA AGCACGGGAT CTCCTCCTGG AACGTCATGA CCGACCCGCA CACCTTCAAG
TACCTGGTCA CCGCGCAGGC GGTGTGGAAG GAAGCGGGCT GGGGACTGAT CGTCTTCCTG
GCCGCGCTGG CCGCCATCGA CCAGTCGCTG TACGAGGCGG CGGCCGTGGA CGGCGCCGGC
CGCTGGCGGC GGATGCGGCA CATCACGATG CCGGGCCTGC GCGGCATCGT GGTGCTGATG
CTCGTACTGC GCCTGGGCAA CGCCCTGAGC GTCGGCTTCG AGCAGATGCT GATCCAGCGC
CAGGCGGTCG GCGCGGGCGC CGCGGACGTC CTGGACACGT ACTCCTACAT CTACGGCATC
GGCGGCGGCT TCGGCTCGGC GACCACCATG GGCGCCGACT ACAGCTACGG CGCCGCGGCG
GGACTGTTCA AAGCAGTCCT GTCGCTGATC CTGATCCTGG GCGCCAACAG ACTCGCGCAC
GCATTCGGTG AGGACGGGTT GTACAGAAAA TGA
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| Protein sequence | MSWRIRLRRD KSLLLMTIPA LALLLVFNYL PMAGIIVAFE HYDIYQGLVH SDFVGLDEFR
QLVANPDFWH AFENTLVISF VQLVLYFPLP IALALMVNTV LSSKVRGFIQ AVVYLPHFFS
YVLVITIFQE FLGGAGVLNV FLNKHGISSW NVMTDPHTFK YLVTAQAVWK EAGWGLIVFL
AALAAIDQSL YEAAAVDGAG RWRRMRHITM PGLRGIVVLM LVLRLGNALS VGFEQMLIQR
QAVGAGAADV LDTYSYIYGI GGGFGSATTM GADYSYGAAA GLFKAVLSLI LILGANRLAH
AFGEDGLYRK
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