| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0059 |
|---|
| Symbol | |
|---|
| ID | 7858262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 63248 |
|---|
| End bp | 64210 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643864137 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002880087 |
|---|
| Protein GI | 229818561 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4209] ABC-type polysaccharide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.542171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.242962 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGA CGCTTCGTGA GGTGGCGCCC CCGTCCGTGC TGAAGGCGCC GCGGAAGCGC
GGGCGCCTGT CGCGACACAT CGGCAGGTAC TGGCAGCTGT GGGCGATGGT GGCTCCGGCG
ATCGCGTTCA TCGCTGTGTT CATGTACGTG CCGATGTACG GGATCCAGCT GGCGTTCCGG
GAGTTCAACT TCGCCACCGG TATCACCGGC GGCGCGTGGG TGGGCTTCAC GTACTTCATC
CAGTTCTTCG AGAGCCCGCT GTTCTGGACG CTCATGCGGA ACACGGTCGT CATCAGCGTC
TCGACGCTCG TCGTCGGATT CGTGACGCCG ATCGTGCTGG CCCTCATCGT GAACCAGGTG
ATCGGGAGGC GCCGGAAGAA GTTCATGCAG ACGGCGACGT ACCTGCCGCA CTTCATCTCC
ATCGTCGTCA TCGTCGGCAT GCTCCAGGTG TTCCTGTCGC CGTCGTCCGG GCTGATCACC
CGTTTCCTCG AGGCGCTCGG GATCACCGGG GTGAACTTCC TCGGTGATAC GACGGCGTTC
GTCCCCGCCT ACGTCATCTC GGAGGCGTGG CAGCACACCG GCTGGAACTC GATCATCTAC
CTCGCGGCGC TCGCCAGCGT CAGTCCCCAG CTGTACGAGG CGGCGAAGAT CGACGGCGCG
AACCGGATGC AGATCATCCG CCACGTCGAC TTCCCGGCGC TCGTGCCCAC GATGATCGTC
CTGCTGATCC TCAACATGGG CGGCGTGCTC GCCACCGGGT TCGAAAAGAT CTTCCTCATG
CAGAACCCGC TGAACCTCGG GATCTCCGAG GTGATCGCGA CGTACGTCTA CAAGATCGGG
ATCATCGGCA ACCAGTTCAG CTACGGCACC GCCATCGGCC TGTTCAACAC GCTCATCAAC
TTCGCCTTCC TGGTCGTCAC GAACCAGGTC GCGAAGCGCG TGTCGAACAC GAGCCTGTGG
TGA
|
|---|
| Protein sequence | MAVTLREVAP PSVLKAPRKR GRLSRHIGRY WQLWAMVAPA IAFIAVFMYV PMYGIQLAFR
EFNFATGITG GAWVGFTYFI QFFESPLFWT LMRNTVVISV STLVVGFVTP IVLALIVNQV
IGRRRKKFMQ TATYLPHFIS IVVIVGMLQV FLSPSSGLIT RFLEALGITG VNFLGDTTAF
VPAYVISEAW QHTGWNSIIY LAALASVSPQ LYEAAKIDGA NRMQIIRHVD FPALVPTMIV
LLILNMGGVL ATGFEKIFLM QNPLNLGISE VIATYVYKIG IIGNQFSYGT AIGLFNTLIN
FAFLVVTNQV AKRVSNTSLW
|
|---|
| |