Gene Bfae_13600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_13600 
Symbol 
ID8399907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp1532186 
End bp1533184 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content66% 
IMG OID644997427 
ProductABC-type polysaccharide transport system, permease component 
Protein accessionYP_003154787 
Protein GI257068532 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4209] ABC-type polysaccharide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.248364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCG ACACCGCACC GCCCGTGCGC GCGGCCCGTC CCGCCCGCGC ACGGGGGAAG 
CGCGGGGCCT CCCGTCCCGC TCCGCGTCGC GTCAGCCTCG CCAGCCGGCT GCGCCGCGAC 
CGCACGCTGA TCCTCATGGC GCTGCCGATG GTGGTGCTGC TGCTGATCTT CGCGTACATC 
CCGATCCTGG GGAACGTGAT CGCCTTCCAG GACTACTCGC CCTTCATCGG GATCCGCGAC 
AGCCCGTGGC TGGGGATGCA GCAGTTCGAA CGGGTCATCG CGGATCCGCT GTTCTGGAAC 
GCCGTGAAGA ACACGTTGGT CATCACTGCG TTCCAGCTGG TGTTCTACTT CCCGATCCCG 
ATCGCGCTGG CGATCCTGCT GAACTCGGTG CTCAGCGAGA AGGTCCGCAC CGTGATCCAG 
TCGATCGTGT ACCTGCCGCA CTTCTTCTCC TGGGTGGTGG TGGTGTCCGT CTTCCACCAG 
ATCCTGGGCG GTGCGGGCCT GCTGAGCCAG TTCACCCGCG AGTTCGGGCT GGGGTCGATG 
AACGTGATGA CGAACCCGGA CACGTTCCTG TTCCTCATCA CCTCGCAGGT GGTGTGGAAG 
GACGCCGGCT GGGGGATCAT CGTGTTCCTC GCCGCGCTGA ACGCCATCGA TCCGGCGCTG 
TACGAATCCG CGGCGATGGA CGGCGCGGGC AAGTGGCGTC GCATCTGGCA CATCACGCTG 
CCCGGGATGC GTGCGGTGAT CGTGCTGCTG CTCATCCTCA ACCTCGGCAA CGCGCTGACG 
GTCGGGTTCG AACAGCTGAT CCTGCAGCGG GACGCCGTCG GCGCCGGGCG CGCAGAAGTC 
CTCGACACCT TCGTCTATTA CACCGGTGTG CAGAACGGCG ACTGGAGCTA TGCCGCCGCT 
GCCGGTCTGC TCAAGGGAGT GGTCAGCATG ATCCTGGTGC TCGGCGCGAA CAAGGTCGCG 
CATCTCTTCG GCGAGGCGGG GGTGTATCAG AAGGCATGA
 
Protein sequence
MSTDTAPPVR AARPARARGK RGASRPAPRR VSLASRLRRD RTLILMALPM VVLLLIFAYI 
PILGNVIAFQ DYSPFIGIRD SPWLGMQQFE RVIADPLFWN AVKNTLVITA FQLVFYFPIP 
IALAILLNSV LSEKVRTVIQ SIVYLPHFFS WVVVVSVFHQ ILGGAGLLSQ FTREFGLGSM 
NVMTNPDTFL FLITSQVVWK DAGWGIIVFL AALNAIDPAL YESAAMDGAG KWRRIWHITL 
PGMRAVIVLL LILNLGNALT VGFEQLILQR DAVGAGRAEV LDTFVYYTGV QNGDWSYAAA 
AGLLKGVVSM ILVLGANKVA HLFGEAGVYQ KA