| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1438 |
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| Symbol | |
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| ID | 7860907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1639631 |
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| End bp | 1640638 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643865525 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002881458 |
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| Protein GI | 229819932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4209] ABC-type polysaccharide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.650576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCA GAACGGCTGA CCGGGCGGGC GTCGCCACGC CCGACGCCGG AACCGAGCGG
GCAGCCGATC CGTCCGTGCC GCCTCCCGCG CACCGTGGGC CGTCGTTCTG GCGGCGCCTG
CGACGGGACC AGGTGCTCGT CCTGTTCGCC GTGCCGGGCG TCGCACTCGT GCTGCTGTTC
CAATACGTGC CGCTGCTCGG CAACGTGATC GCGTTCCAGG ACTACCAGCC GTTCCTCGGG
ATCGGCGACA GCCCGTGGGT CGGCTGGGAC AACTTCGCGA TCATCGTGAG CGGCGACCCG
GCGTTCCTGG CCGCCCTGCG CAACACGCTG CTCCTCACAG CCCTGCAGGT GCTGCTCGTG
TTCCCCGCGC CGATCGCGCT CGCCCTGCTG CTCAACAGCC TCGCATCCGA GACCCTCAAG
CGGATCGTGC AGAACGTCCT GTACCTGCCG CACTTCCTGT CCTGGGTCAT CGTGGTGGCG
CTGTTCCAGC AGATGCTCGG CGGCAGCGGG CTGCTCAACG CGTTCCTGCG CTCCCACGAC
ATGGCGACGC TCGAGATCAT CGGCAACCCC GACGTCTTCC ACCTGCTCCT CACCTGGCAG
GTCATCTGGA AGGACACCGG CTGGGCGACG ATCCTGTTCC TGGCCGCCCT GTCGACCGTC
TCGCCGCAGC TGTACGAGGC GGCGAGCGTC GACGGCGCCG GCCGGATGCG GCAGATGTGG
CACATCACGC TCCCGGCCCT GCGCGGCATC GTGATCCTGC TGTTCATCCT GCGCCTCGGC
GACTCGCTGA CCGTGGGATT CGAGCAGATC CTGCTGCAGC AGGACGCCGT CGGACGGGCC
GTCAGCGAGG TCCTCGACAC CTACGTCTAC AACAACGGGA TCCTCGGTGG CGCCTGGGGC
ACCTCGGCGG CCGTCGGGCT CGTGAAGGGC GTCGTGGGCG TCGTCCTCGT GCTCGCGGCG
AACAAGGTCG CGCACATCTT CGGTGAGGAA GGGGTGTACC GCTCGTGA
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| Protein sequence | MPSRTADRAG VATPDAGTER AADPSVPPPA HRGPSFWRRL RRDQVLVLFA VPGVALVLLF
QYVPLLGNVI AFQDYQPFLG IGDSPWVGWD NFAIIVSGDP AFLAALRNTL LLTALQVLLV
FPAPIALALL LNSLASETLK RIVQNVLYLP HFLSWVIVVA LFQQMLGGSG LLNAFLRSHD
MATLEIIGNP DVFHLLLTWQ VIWKDTGWAT ILFLAALSTV SPQLYEAASV DGAGRMRQMW
HITLPALRGI VILLFILRLG DSLTVGFEQI LLQQDAVGRA VSEVLDTYVY NNGILGGAWG
TSAAVGLVKG VVGVVLVLAA NKVAHIFGEE GVYRS
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