Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3708 |
Symbol | |
ID | 6089719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4094532 |
End bp | 4095416 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641598796 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001722428 |
Protein GI | 170025923 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACGC TAACCCCCCG ACTGAAACGT AACCTGGTTC CGTGGCTGTT CCTGGCCCCG GCACTGGTCA TCTTCACCTG GTTTAAATTC ATCCCGATGT TGCAAGGGCT GGTGATGAGT TTCTACAAGG TTAACTTTAA CCAGCCAAAC GAGTGGGTCG GGTTTGCCAA CTTTTCCCGC GCCTTTGGTG ATGAAGCGCT GCACTCGGCT GTTTTCAACA CGTTGTTATA TGTCCTGGTC ACCATGGTGG TGGCCGCGTT TATCGCCTTC TTTCTGGCGA TGTTATTGGA AGGGCCGGCA CGGCATTTGC GTTTTATTCG TACCGCCATC TTCCTGCCCG CAGTGACCAG TGCGGCGATT GTCGCCGAAA TGTGGCGCAT TCTGTTCAAC CCGACCAGCA ACGGGGTGGT GAACCACGTT TTATCGTGGT TCAGCATTGA AGCGCAGGGG TTTCTGGCGG ATACCGATCA GGCGTTGTGG ACAGTAATGC TGCTGCATAT CTGGAAAGCA GTGCCTTACA ACATGGTGAT TTTTATCGCC GGGCTGGTAG GGATTAGCCG TGATTTATAC GACGCGTCAA ACGTGGATGG GGCCAACTGG TGGAACCGCC TGCGTTATGT GACGTTACCG GGCATGATCC CCGCGCTCTC TGTGGTCCTG ATGCTGTCAT TTATCCGTGG CTTCCGCGTG TTTGCCGAAG TTTACGCCAC CACTGGCGGT GGCCCGTCTA ATGCGACGGA AATGATCATG ACGCATATCT ATAAATTGGG CTTTGAGCAG TTTGATTATG GTTATGCCTC TGCGGTGTCC TTCCTGCTAT TTGCGTTCAC TGTGATGCTG ACGATGGGTC ATCTCACCTT GAAAAAGCGG ATCGCCCGTT ACTAA
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Protein sequence | MITLTPRLKR NLVPWLFLAP ALVIFTWFKF IPMLQGLVMS FYKVNFNQPN EWVGFANFSR AFGDEALHSA VFNTLLYVLV TMVVAAFIAF FLAMLLEGPA RHLRFIRTAI FLPAVTSAAI VAEMWRILFN PTSNGVVNHV LSWFSIEAQG FLADTDQALW TVMLLHIWKA VPYNMVIFIA GLVGISRDLY DASNVDGANW WNRLRYVTLP GMIPALSVVL MLSFIRGFRV FAEVYATTGG GPSNATEMIM THIYKLGFEQ FDYGYASAVS FLLFAFTVML TMGHLTLKKR IARY
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