More than 300 homologs were found in PanDaTox collection
for query gene Amir_5376 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_5376  transcriptional regulator, LuxR family  100 
 
 		 213 aa  421  1e-117  Actinosynnema mirum DSM 43827  Bacteria  normal  0.416669  n/a   
 
 
-
 
NC_013235  Namu_1891  transcriptional regulator, LuxR family  53.88 
 
 		 230 aa  196  3e-49  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00164243  normal  0.142555 
 
 
-
 
NC_014151  Cfla_2255  transcriptional regulator, LuxR family  51.92 
 
 		 207 aa  191  6e-48  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0543436  hitchhiker  0.000519578 
 
 
-
 
NC_009077  Mjls_0940  response regulator receiver protein  47.6 
 
 		 207 aa  189  4e-47  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_4852  LuxR family transcriptional regulator  46.41 
 
 		 207 aa  180  2e-44  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0262091 
 
 
-
 
NC_013093  Amir_2930  transcriptional regulator, LuxR family  45.41 
 
 		 208 aa  159  4e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
-
 
NC_009921  Franean1_3808  LuxR family transcriptional regulator  50 
 
 		 268 aa  148  5e-35  Frankia sp. EAN1pec  Bacteria  normal  0.0706178  normal  0.229787 
 
 
-
 
NC_013093  Amir_2952  transcriptional regulator, LuxR family  43.13 
 
 		 207 aa  139  3e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0281323  n/a   
 
 
-
 
NC_009953  Sare_0350  LuxR family transcriptional regulator  43.06 
 
 		 202 aa  139  3e-32  Salinispora arenicola CNS-205  Bacteria  normal  0.204823  normal  0.0810275 
 
 
-
 
NC_014151  Cfla_2886  transcriptional regulator, LuxR family  39.91 
 
 		 252 aa  125  5e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.197544  normal  0.152863 
 
 
-
 
NC_013131  Caci_4395  transcriptional regulator, LuxR family  41.9 
 
 		 208 aa  118  7e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_3574  transcriptional regulator, LuxR family  43.52 
 
 		 206 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_10197  LuxR family two component transcriptional regulator  32.54 
 
 		 232 aa  99.8  3e-20  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  38.73 
 
 		 218 aa  89  4e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  31.48 
 
 		 215 aa  85.1  7e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  27.91 
 
 		 210 aa  82  0.000000000000006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  27.57 
 
 		 210 aa  80.1  0.00000000000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  27.57 
 
 		 210 aa  80.1  0.00000000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  27.57 
 
 		 210 aa  80.1  0.00000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  27.57 
 
 		 210 aa  80.5  0.00000000000002  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  27.57 
 
 		 210 aa  80.1  0.00000000000002  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  27.57 
 
 		 210 aa  80.1  0.00000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  27.57 
 
 		 210 aa  80.1  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  27.57 
 
 		 210 aa  80.1  0.00000000000002  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  27.57 
 
 		 210 aa  79.7  0.00000000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  27.1 
 
 		 210 aa  79.3  0.00000000000004  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  26.94 
 
 		 210 aa  78.2  0.00000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  35.71 
 
 		 216 aa  77.8  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  38.06 
 
 		 222 aa  77  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  29.36 
 
 		 224 aa  76.3  0.0000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  32.57 
 
 		 206 aa  76.6  0.0000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  33.02 
 
 		 225 aa  76.6  0.0000000000003  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009953  Sare_0351  LuxR family transcriptional regulator  38.13 
 
 		 195 aa  76.3  0.0000000000003  Salinispora arenicola CNS-205  Bacteria  normal  0.147651  normal  0.0771656 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  30.97 
 
 		 220 aa  76.3  0.0000000000004  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  30.57 
 
 		 228 aa  75.5  0.0000000000005  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  31.19 
 
 		 219 aa  75.5  0.0000000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  34.09 
 
 		 230 aa  75.1  0.0000000000008  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  28.37 
 
 		 231 aa  74.7  0.000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  34.27 
 
 		 207 aa  74.3  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  28.31 
 
 		 217 aa  73.9  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008146  Mmcs_1619  two component LuxR family transcriptional regulator  32.9 
 
 		 163 aa  73.2  0.000000000003  Mycobacterium sp. MCS  Bacteria  normal  0.113726  n/a   
 
 
-
 
NC_008705  Mkms_1644  two component LuxR family transcriptional regulator  32.9 
 
 		 163 aa  73.2  0.000000000003  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_1592  two component LuxR family transcriptional regulator  32.9 
 
 		 162 aa  73.2  0.000000000003  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  34.92 
 
 		 219 aa  72.4  0.000000000005  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  34.92 
 
 		 219 aa  72.4  0.000000000005  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  34.92 
 
 		 219 aa  72.4  0.000000000005  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal  1 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  27.19 
 
 		 239 aa  72  0.000000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  31.21 
 
 		 224 aa  71.6  0.000000000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  34.29 
 
 		 227 aa  72  0.000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  28.23 
 
 		 208 aa  72  0.000000000007  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  31.65 
 
 		 220 aa  71.6  0.000000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  33.8 
 
 		 219 aa  70.9  0.00000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  28.37 
 
 		 213 aa  70.9  0.00000000001  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  29.86 
 
 		 218 aa  71.2  0.00000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  34.27 
 
 		 218 aa  70.9  0.00000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  33.08 
 
 		 221 aa  70.1  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  25.64 
 
 		 233 aa  70.5  0.00000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  32.39 
 
 		 213 aa  70.9  0.00000000002  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  29.25 
 
 		 219 aa  69.7  0.00000000003  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  36.69 
 
 		 212 aa  70.1  0.00000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  36.81 
 
 		 209 aa  69.3  0.00000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  29.22 
 
 		 226 aa  69.3  0.00000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  27.11 
 
 		 226 aa  69.3  0.00000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  32.55 
 
 		 225 aa  69.3  0.00000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  34.78 
 
 		 207 aa  68.9  0.00000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  33.85 
 
 		 226 aa  68.9  0.00000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  34.97 
 
 		 225 aa  68.9  0.00000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_009767  Rcas_2258  two component LuxR family transcriptional regulator  34.57 
 
 		 254 aa  69.3  0.00000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  hitchhiker  0.00245701 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  31.46 
 
 		 220 aa  68.9  0.00000000006  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_009921  Franean1_6596  two component LuxR family transcriptional regulator  35 
 
 		 249 aa  68.9  0.00000000006  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  30.22 
 
 		 238 aa  68.6  0.00000000007  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  36.36 
 
 		 219 aa  68.6  0.00000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009523  RoseRS_1633  two component LuxR family transcriptional regulator  33.95 
 
 		 254 aa  68.6  0.00000000007  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  29.5 
 
 		 237 aa  68.2  0.00000000008  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  33.33 
 
 		 217 aa  68.6  0.00000000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  30.09 
 
 		 218 aa  68.6  0.00000000008  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  32.06 
 
 		 228 aa  68.2  0.00000000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013093  Amir_3573  transcriptional regulator, LuxR family  35.42 
 
 		 189 aa  68.2  0.00000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  30.14 
 
 		 218 aa  68.2  0.00000000009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  34.62 
 
 		 217 aa  67.4  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  27.85 
 
 		 217 aa  67.4  0.0000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  34.62 
 
 		 217 aa  67.4  0.0000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  34.04 
 
 		 225 aa  67.4  0.0000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  35.25 
 
 		 217 aa  67.8  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  27.48 
 
 		 225 aa  67.8  0.0000000001  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  28.37 
 
 		 303 aa  67.8  0.0000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  31.43 
 
 		 253 aa  67.8  0.0000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  31.55 
 
 		 207 aa  67  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  32.09 
 
 		 220 aa  66.6  0.0000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  29.37 
 
 		 234 aa  67  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  29.6 
 
 		 219 aa  67  0.0000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  34 
 
 		 219 aa  67  0.0000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  30.56 
 
 		 221 aa  66.6  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  28.83 
 
 		 213 aa  67  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.999676 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  30.22 
 
 		 250 aa  67  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  31.31 
 
 		 234 aa  66.6  0.0000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_013131  Caci_6284  two component transcriptional regulator, LuxR family  28.85 
 
 		 217 aa  66.6  0.0000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  26.7 
 
 		 218 aa  66.6  0.0000000003  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  30.04 
 
 		 227 aa  66.6  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.86 
 
 		 239 aa  66.2  0.0000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
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