More than 300 homologs were found in PanDaTox collection
for query gene Sare_4852 on replicon NC_009953
Organism: Salinispora arenicola CNS-205



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_4852  LuxR family transcriptional regulator  100 
 
 
207 aa  409  1e-113  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0262091 
 
 
-
 
NC_013093  Amir_2952  transcriptional regulator, LuxR family  58.94 
 
 
207 aa  216  1e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0281323  n/a   
 
 
-
 
NC_013093  Amir_5376  transcriptional regulator, LuxR family  46.41 
 
 
213 aa  180  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.416669  n/a   
 
 
-
 
NC_013235  Namu_1891  transcriptional regulator, LuxR family  48.74 
 
 
230 aa  162  4.0000000000000004e-39  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00164243  normal  0.142555 
 
 
-
 
NC_014151  Cfla_2255  transcriptional regulator, LuxR family  46.86 
 
 
207 aa  161  5.0000000000000005e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0543436  hitchhiker  0.000519578 
 
 
-
 
NC_009077  Mjls_0940  response regulator receiver protein  46.63 
 
 
207 aa  154  1e-36  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2930  transcriptional regulator, LuxR family  43.9 
 
 
208 aa  136  2e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
-
 
NC_009921  Franean1_3808  LuxR family transcriptional regulator  44.38 
 
 
268 aa  121  6e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0706178  normal  0.229787 
 
 
-
 
NC_013131  Caci_4395  transcriptional regulator, LuxR family  41.06 
 
 
208 aa  117  9.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0350  LuxR family transcriptional regulator  37.68 
 
 
202 aa  109  2.0000000000000002e-23  Salinispora arenicola CNS-205  Bacteria  normal  0.204823  normal  0.0810275 
 
 
-
 
NC_009565  TBFG_10197  LuxR family two component transcriptional regulator  32.85 
 
 
232 aa  103  2e-21  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3574  transcriptional regulator, LuxR family  42.93 
 
 
206 aa  99.4  3e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2886  transcriptional regulator, LuxR family  34.2 
 
 
252 aa  92  5e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.197544  normal  0.152863 
 
 
-
 
NC_011884  Cyan7425_4561  two component transcriptional regulator, LuxR family  28.44 
 
 
217 aa  81.3  0.00000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  29.09 
 
 
217 aa  76.6  0.0000000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  28.25 
 
 
220 aa  77  0.0000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  31.63 
 
 
215 aa  75.1  0.0000000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  31.05 
 
 
234 aa  73.2  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013093  Amir_3573  transcriptional regulator, LuxR family  41.73 
 
 
189 aa  72  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  30.18 
 
 
221 aa  72.4  0.000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  30.14 
 
 
237 aa  72  0.000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  31.51 
 
 
207 aa  71.6  0.000000000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  32.43 
 
 
236 aa  71.6  0.000000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  30.14 
 
 
237 aa  71.6  0.000000000009  Frankia sp. CcI3  Bacteria  normal  0.272345  normal 
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  37.14 
 
 
219 aa  70.5  0.00000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  29.36 
 
 
250 aa  70.5  0.00000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  28.9 
 
 
238 aa  69.3  0.00000000004  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_009953  Sare_0351  LuxR family transcriptional regulator  42.99 
 
 
195 aa  69.3  0.00000000004  Salinispora arenicola CNS-205  Bacteria  normal  0.147651  normal  0.0771656 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  35.19 
 
 
213 aa  67.8  0.0000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1619  two component LuxR family transcriptional regulator  34.46 
 
 
163 aa  67.4  0.0000000001  Mycobacterium sp. MCS  Bacteria  normal  0.113726  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  30.94 
 
 
303 aa  67.8  0.0000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_008705  Mkms_1644  two component LuxR family transcriptional regulator  34.46 
 
 
163 aa  67.4  0.0000000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1592  two component LuxR family transcriptional regulator  34.46 
 
 
162 aa  67.4  0.0000000001  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_5070  two component transcriptional regulator, LuxR family  26.51 
 
 
210 aa  67.4  0.0000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.744929 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  33.11 
 
 
213 aa  67  0.0000000002  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  35.86 
 
 
218 aa  66.2  0.0000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  32.71 
 
 
208 aa  66.6  0.0000000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  33.48 
 
 
225 aa  65.9  0.0000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013131  Caci_6284  two component transcriptional regulator, LuxR family  29.36 
 
 
217 aa  65.5  0.0000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  31.47 
 
 
210 aa  65.9  0.0000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  27.39 
 
 
226 aa  65.5  0.0000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  33.33 
 
 
234 aa  65.5  0.0000000005  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  31.94 
 
 
222 aa  65.9  0.0000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  35.51 
 
 
219 aa  65.1  0.0000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  30.7 
 
 
222 aa  63.9  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  28.18 
 
 
213 aa  64.3  0.000000001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  33.64 
 
 
226 aa  64.3  0.000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  33.33 
 
 
253 aa  64.3  0.000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  29.5 
 
 
210 aa  64.3  0.000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  33.33 
 
 
213 aa  63.5  0.000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  29.63 
 
 
210 aa  63.5  0.000000002  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  26.64 
 
 
217 aa  63.2  0.000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  30.32 
 
 
239 aa  63.5  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.87 
 
 
223 aa  63.5  0.000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal 
 
 
-
 
NC_002936  DET1350  LuxR family DNA-binding response regulator  27.48 
 
 
225 aa  63.2  0.000000003  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.00111586  n/a   
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  33.11 
 
 
217 aa  63.2  0.000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  33.64 
 
 
218 aa  62.8  0.000000003  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  32.61 
 
 
217 aa  63.2  0.000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  35 
 
 
216 aa  62.8  0.000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  30.22 
 
 
227 aa  62.4  0.000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  28.84 
 
 
209 aa  62.4  0.000000005  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  25.58 
 
 
210 aa  62.4  0.000000005  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.147525 
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  25.58 
 
 
210 aa  62.4  0.000000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  33.33 
 
 
213 aa  62.4  0.000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  35.85 
 
 
219 aa  62.4  0.000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009767  Rcas_4428  two component LuxR family transcriptional regulator  26.75 
 
 
231 aa  62  0.000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  34.51 
 
 
221 aa  62  0.000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013552  DhcVS_1132  DNA-binding response regulator, LuxR family  27.48 
 
 
225 aa  62  0.000000006  Dehalococcoides sp. VS  Bacteria  normal  0.893152  n/a   
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  34.91 
 
 
262 aa  62  0.000000006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.14 
 
 
218 aa  62  0.000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_010718  Nther_2079  two component transcriptional regulator, LuxR family  27.14 
 
 
212 aa  61.6  0.000000007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  34.91 
 
 
220 aa  61.6  0.000000007  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_006274  BCZK1321  response regulator  30.71 
 
 
210 aa  61.6  0.000000008  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  33.64 
 
 
219 aa  61.6  0.000000008  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013216  Dtox_3754  two component transcriptional regulator, LuxR family  28.71 
 
 
216 aa  61.6  0.000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00290124  normal 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  30.71 
 
 
210 aa  61.6  0.000000008  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  30.71 
 
 
210 aa  61.6  0.000000009  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  30.71 
 
 
210 aa  61.6  0.000000009  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  30.71 
 
 
210 aa  61.6  0.000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  30.71 
 
 
210 aa  61.6  0.000000009  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  30.71 
 
 
210 aa  61.6  0.000000009  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  34.58 
 
 
219 aa  61.2  0.000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  30.71 
 
 
210 aa  61.6  0.000000009  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  36.19 
 
 
221 aa  61.2  0.00000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  30.71 
 
 
210 aa  60.8  0.00000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  36.94 
 
 
213 aa  61.2  0.00000001  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  34.06 
 
 
231 aa  60.8  0.00000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  30.88 
 
 
210 aa  61.2  0.00000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  37.14 
 
 
215 aa  61.2  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  26.58 
 
 
242 aa  60.1  0.00000002  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  30.29 
 
 
217 aa  60.1  0.00000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4518  two component LuxR family transcriptional regulator  26.73 
 
 
236 aa  60.5  0.00000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  34.31 
 
 
219 aa  60.5  0.00000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  30.58 
 
 
213 aa  60.1  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_013739  Cwoe_0253  two component transcriptional regulator, LuxR family  33.03 
 
 
218 aa  60.1  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.649746 
 
 
-
 
NC_012669  Bcav_3804  two component transcriptional regulator, LuxR family  36.67 
 
 
216 aa  60.1  0.00000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.185264  normal 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  33.33 
 
 
207 aa  60.1  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  38.53 
 
 
225 aa  60.1  0.00000002  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_3519  response regulator receiver protein  36.19 
 
 
220 aa  59.7  0.00000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  24.31 
 
 
227 aa  59.7  0.00000003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
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